RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TNRC6BQ9UPQ9 1833 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 TRAV30A0A087WSZ9 112 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 FAM236DA0A1B0GTK5 79 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 PNMA8CA0A1B0GUJ8 204 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 RIIAD1A6NNX1 92 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 OR2H2O95918 312 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 IFI6P09912 130 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 UCHL1P09936 223 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 SMIM17P0DL12 118 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 FAM236CP0DP71 79 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 HIST1H1BP16401 226 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 RPL27AP46776 148 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 TNFAIP6P98066 277 aaPredicted RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 HIST1H1AQ02539 215 aaPredicted RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 MORN2Q502X0 79 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 FAM201AQ5SY85 155 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 NCMAPQ5T1S8 102 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 LYRM7Q5U5X0 104 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 ZCCHC23Q6ZST2 131 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 ANKRD29Q8N6D5 301 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 TMEM229BQ8NBD8 167 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 ZNF418Q8TF45 676 aaPredicted RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 GPR146Q96CH1 333 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 OR52B2Q96RD2 323 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 OR2H1Q9GZK4 316 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 CHST6Q9GZX3 395 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 PBOV1Q9GZY1 135 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 METTL1Q9UBP6 276 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 SNRNP200O75643 2136 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 CNOT1A5YKK6 2376 aaKnown RBP2.87□□□□□ -1.95
USP54-206ENST00000433394 GVINP1Q7Z2Y8 2422 aa2.87□□□□□ -1.95
USP54-206ENST00000433394 COL5A1P20908 1838 aaPredicted RBP2.86□□□□□ -1.95
USP54-206ENST00000433394 TRAV38-1A0A0B4J264 116 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 DUXBA0A1W2PPF3 345 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 TLCD2A6NGC4 264 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 C1orf196B1AJZ1 125 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 C9JAW5 83 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 SNAPC5O75971 98 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 LGALS1P09382 135 aaKnown RBP2.86□□□□□ -1.95
USP54-206ENST00000433394 CRYBB3P26998 211 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 BLVRBP30043 206 aaPredicted RBP2.86□□□□□ -1.95
USP54-206ENST00000433394 GNG4P50150 75 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 RPS25P62851 125 aaKnown RBP2.86□□□□□ -1.95
USP54-206ENST00000433394 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 PABPC1L2AQ5JQF8 200 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.86□□□□□ -1.95
USP54-206ENST00000433394 C6orf52Q5T4I8 152 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 ZNF550Q7Z398 422 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 OR2J1Q9GZK6 312 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 COMMD5Q9GZQ3 224 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 MINOS1-NBL1R4GNA1 71 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 ASXL3Q9C0F0 2248 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 ZNF407Q9C0G0 2248 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 LAMA1P25391 3075 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 PCNX2A6NKB5 2137 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 KMT2EQ8IZD2 1858 aa2.86□□□□□ -1.95
USP54-206ENST00000433394 RP1P56715 2156 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 PTPRZ1P23471 2315 aaPredicted RBP2.85□□□□□ -1.95
USP54-206ENST00000433394 DSCAML1Q8TD84 2053 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 A0A087WUU8 490 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 TRAV26-2A0A0B4J265 109 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 A0A0J9YY10 115 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 A0A1B0GX78 115 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 OR4C45A6NMZ5 311 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 IFITM5A6NNB3 132 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 KNCNA6PVL3 124 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 FABP5P3A8MUU1 101 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 APOMO95445 188 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 IFNA7P01567 189 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 LINC00032P0C843 101 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 FGF6P10767 208 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 RPL7P18124 248 aaKnown RBP2.85□□□□□ -1.95
USP54-206ENST00000433394 GUCA1AP43080 201 aaPredicted RBP2.85□□□□□ -1.95
USP54-206ENST00000433394 POLR2HP52434 150 aaKnown RBP2.85□□□□□ -1.95
USP54-206ENST00000433394 POLR2JP52435 117 aaKnown RBP2.85□□□□□ -1.95
USP54-206ENST00000433394 TAS2R20P59543 309 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 CDK6Q00534 326 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 FABP9Q0Z7S8 132 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 SNX29P2Q8IUI4 249 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 C9orf62Q8N4C0 152 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 DAND5Q8N907 189 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 CNEP1R1Q8N9A8 125 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 OR2T27Q8NH04 317 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 RPS4Y2Q8TD47 263 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 KLK6Q92876 244 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 SLAMF6Q96DU3 332 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 TMEM147Q9BVK8 224 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 DPY30Q9C005 99 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 RERGLQ9H628 205 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 TNFSF18Q9UNG2 199 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 RNF11Q9Y3C5 154 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 FRYLO94915 3013 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 VPS13AQ96RL7 3174 aa2.85□□□□□ -1.95
USP54-206ENST00000433394 CEP250Q9BV73 2442 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 AHCTF1Q8WYP5 2266 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms