RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SLC50A1Q9BRV3 221 aa7.39□□□□□ -1.23
ATG4B-212ENST00000430617 NKX6-2Q9C056 277 aaPredicted RBP7.39□□□□□ -1.23
ATG4B-212ENST00000430617 SLC35B3Q9H1N7 401 aa7.39□□□□□ -1.23
ATG4B-212ENST00000430617 TREM1Q9NP99 234 aa7.39□□□□□ -1.23
ATG4B-212ENST00000430617 ZNF331Q9NQX6 463 aaPredicted RBP7.39□□□□□ -1.23
ATG4B-212ENST00000430617 OTORQ9NRC9 128 aa7.39□□□□□ -1.23
ATG4B-212ENST00000430617 PDE6DO43924 150 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 RANP62826 216 aaKnown RBP7.38□□□□□ -1.23
ATG4B-212ENST00000430617 C10orf91Q5T1B1 145 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 TCF24Q7RTU0 167 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 WFDC3Q8IUB2 231 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 C5orf17Q8NAS9 161 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 C2CD4CQ8TF44 421 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 NRN1Q9NPD7 142 aa7.38□□□□□ -1.23
ATG4B-212ENST00000430617 PEX7O00628 323 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
ATG4B-212ENST00000430617 GNG5P63218 68 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 PSG9Q00887 426 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 DCANP1Q8TF63 244 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 RNF183Q96D59 192 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 PARLQ9H300 379 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 CARHSP1Q9Y2V2 147 aaKnown RBP7.37□□□□□ -1.23
ATG4B-212ENST00000430617 SELENOKQ9Y6D0 94 aa7.37□□□□□ -1.23
ATG4B-212ENST00000430617 PGPA6NDG6 321 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 KRBOX1C9JBD0 128 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 M0R3E3 92 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 TCRAP04437 139 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 SLC25A5P05141 298 aaKnown RBP7.36□□□□□ -1.23
ATG4B-212ENST00000430617 CD300EQ496F6 205 aaPredicted RBP7.36□□□□□ -1.23
ATG4B-212ENST00000430617 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 Q8N1X5 172 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 ARL6IP6Q8N6S5 226 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 MRPL53Q96EL3 112 aaKnown RBP7.36□□□□□ -1.23
ATG4B-212ENST00000430617 ATG101Q9BSB4 218 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 DERL1Q9BUN8 251 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
ATG4B-212ENST00000430617 TRBV20OR9-2A0A075B6H5 130 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 TRAV2A0A0B4J234 112 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 K7EQG2 157 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 ISLRO14498 428 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 TSPAN4O14817 238 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 CDK2AP2O75956 126 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 DEFB114Q30KQ6 69 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 SAMD13Q5VXD3 122 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 IGFL4Q6B9Z1 124 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 DYNLRB2Q8TF09 96 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 HIST1H2BAQ96A08 127 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 RPUSD4Q96CM3 377 aaKnown RBP7.35□□□□□ -1.23
ATG4B-212ENST00000430617 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 IGF2BP2-AS1Q96M15 143 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 MS4A6AQ9H2W1 248 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 AAMDCQ9H7C9 122 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 EPDR1Q9UM22 224 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 PRELID1Q9Y255 219 aa7.35□□□□□ -1.23
ATG4B-212ENST00000430617 C9JCJ5 164 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 F8W036 122 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 SPRY2O43597 315 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 IGLV2-11P01706 119 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 AKR1C3P42330 323 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 CEBPGP53567 150 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 NANOS2P60321 138 aaKnown RBP7.34□□□□□ -1.23
ATG4B-212ENST00000430617 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.23
ATG4B-212ENST00000430617 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 Q86TA4 180 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 FAM24BQ8N5W8 94 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 SCRT2Q9NQ03 307 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 CLEC5AQ9NY25 188 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 KLF12Q9Y4X4 402 aa7.34□□□□□ -1.23
ATG4B-212ENST00000430617 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 IGKV2-40A0A087WW87 121 aaPredicted RBP7.33□□□□□ -1.24
ATG4B-212ENST00000430617 LOC102724200A0A096LPH7 203 aaPredicted RBP7.33□□□□□ -1.24
ATG4B-212ENST00000430617 TRAV25A0A0B4J276 109 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 SERTM2A0A1B0GWG4 89 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 PRAC2D3DTV9 90 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 IGKV2D-40P01614 121 aaPredicted RBP7.33□□□□□ -1.24
ATG4B-212ENST00000430617 RPL35P42766 123 aaKnown RBP7.33□□□□□ -1.24
ATG4B-212ENST00000430617 PSG3Q16557 428 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 TMEM183BQ1AE95 376 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 GOLT1AQ6ZVE7 132 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 GBGT1Q8N5D6 347 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
ATG4B-212ENST00000430617 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 RPH3ALQ9UNE2 315 aa7.33□□□□□ -1.24
ATG4B-212ENST00000430617 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
ATG4B-212ENST00000430617 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
ATG4B-212ENST00000430617 M0R2N4 97 aa7.32□□□□□ -1.24
ATG4B-212ENST00000430617 PRB4P10163 310 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms