RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 Q6ZPA2 131 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 BEX4Q9NWD9 120 aaPredicted RBP11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 IGHV1-24A0A0C4DH33 117 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 RUSC1-AS1Q66K80 236 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 SIVA1O15304 175 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
AP000550.1-201ENST00000420508 TMEM213A2RRL7 107 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 PAX2Q02962 417 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 FOXE3Q13461 319 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 G3V318 75 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 CD33P20138 364 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 UBE2V1Q13404 147 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 PATE2Q6UY27 113 aa11.67□□□□□ -0.54
AP000550.1-201ENST00000420508 LINC01619G3V211 115 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 ESDP10768 282 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 TMEM89A2RUT3 159 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 SP5Q6BEB4 398 aaPredicted RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 APOMO95445 188 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 A8MWV9 139 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
AP000550.1-201ENST00000420508 TAL2Q16559 108 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 MSMPQ1L6U9 139 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 MPV17L2Q567V2 206 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 ZNF124Q15973 351 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 COX8AP10176 69 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
AP000550.1-201ENST00000420508 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 TRGV4A0A0C4DH28 118 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 SRD5A1P18405 259 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 RASL10AQ92737 203 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 SIGLEC8Q9NYZ4 499 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 DOCK11Q5JSL3 2073 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 ADORA2A-AS1P86434 159 aa11.64□□□□□ -0.55
AP000550.1-201ENST00000420508 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 SMIM2Q9BVW6 85 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 EP400Q96L91 3159 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 CDKN1BP46527 198 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 GAGE1Q13065 139 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 RNF114Q9Y508 228 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 Q8NA96 180 aa11.63□□□□□ -0.55
AP000550.1-201ENST00000420508 A0A087X0K7 114 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 A0A1B0GUS0 222 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 ZNF493Q6ZR52 646 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 ZNF295-AS1Q8N0V1 137 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 EREGO14944 169 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 ERG28Q9UKR5 140 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 PCNX3Q9H6A9 2034 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 ROS1P08922 2347 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 Q5PR19 223 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 C2orf66Q6UXQ4 117 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 SPXQ9BT56 116 aa11.62□□□□□ -0.55
AP000550.1-201ENST00000420508 BRWD1-AS2P59051 145 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 MED14OSP0DP75 135 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 PMVKQ15126 192 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 LCNL1Q6ZST4 164 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 INTS1Q8N201 2190 aaKnown RBP11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 I3L3M4 83 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 GAGE13Q4V321 117 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 RNF152Q8N8N0 203 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 Q8N9W7 124 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 VGLL1Q99990 258 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 SAP30O75446 220 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
AP000550.1-201ENST00000420508 CTSGP08311 255 aa11.6□□□□□ -0.55
AP000550.1-201ENST00000420508 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
AP000550.1-201ENST00000420508 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms