RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 FRAS1Q86XX4 4008 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 BOLA2-SMG1P6H3BVE0 249 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 EXOC3-AS1Q8N2X6 119 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 TMEM167BQ9NRX6 74 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 XCL2Q9UBD3 114 aa12.02□□□□□ -0.49
SF1-207ENST00000413951 M0R3E3 92 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 SULT1A2P50226 295 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
SF1-207ENST00000413951 ZNF705FA8MVS1 300 aaPredicted RBP12□□□□□ -0.49
SF1-207ENST00000413951 PRAC2D3DTV9 90 aa12□□□□□ -0.49
SF1-207ENST00000413951 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
SF1-207ENST00000413951 RANP62826 216 aaKnown RBP12□□□□□ -0.49
SF1-207ENST00000413951 ICAM4Q14773 271 aa12□□□□□ -0.49
SF1-207ENST00000413951 C12orf74Q32Q52 190 aa12□□□□□ -0.49
SF1-207ENST00000413951 AMTNQ6UX39 209 aa12□□□□□ -0.49
SF1-207ENST00000413951 FAM210BQ96KR6 192 aa12□□□□□ -0.49
SF1-207ENST00000413951 Q9H3A6 140 aa12□□□□□ -0.49
SF1-207ENST00000413951 OTORQ9NRC9 128 aa12□□□□□ -0.49
SF1-207ENST00000413951 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
SF1-207ENST00000413951 DUSP14O95147 198 aaKnown RBP11.99□□□□□ -0.49
SF1-207ENST00000413951 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
SF1-207ENST00000413951 ARL6IP6Q8N6S5 226 aa11.99□□□□□ -0.49
SF1-207ENST00000413951 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
SF1-207ENST00000413951 NPIPB6E9PJ23 425 aa11.98□□□□□ -0.49
SF1-207ENST00000413951 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
SF1-207ENST00000413951 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
SF1-207ENST00000413951 DNAH10Q8IVF4 4471 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 A0A1W2PRE2 83 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 H2AFB1P0C5Y9 115 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 ZNF705DP0CH99 300 aaPredicted RBP11.97□□□□□ -0.49
SF1-207ENST00000413951 ZNF705BP0CI00 300 aaPredicted RBP11.97□□□□□ -0.49
SF1-207ENST00000413951 HIST1H1AQ02539 215 aaPredicted RBP11.97□□□□□ -0.49
SF1-207ENST00000413951 FAM74A1Q5RGS3 127 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 GOLT1BQ9Y3E0 138 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 ARL2-SNX15V9GYD0 113 aa11.97□□□□□ -0.49
SF1-207ENST00000413951 GGTLC3B5MD39 225 aa11.96□□□□□ -0.49
SF1-207ENST00000413951 ALKAL2Q6UX46 152 aa11.96□□□□□ -0.49
SF1-207ENST00000413951 OR4B1Q8NGF8 309 aa11.96□□□□□ -0.49
SF1-207ENST00000413951 OR10J6PQ8NGY7 276 aa11.96□□□□□ -0.49
SF1-207ENST00000413951 RXFP4Q8TDU9 374 aa11.96□□□□□ -0.49
SF1-207ENST00000413951 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
SF1-207ENST00000413951 RBAKDNA6NC62 111 aa11.95□□□□□ -0.5
SF1-207ENST00000413951 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
SF1-207ENST00000413951 ODF3Q96PU9 254 aa11.95□□□□□ -0.5
SF1-207ENST00000413951 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
SF1-207ENST00000413951 YTHDF2Q9Y5A9 579 aaKnown RBP11.95□□□□□ -0.5
SF1-207ENST00000413951 PGPA6NDG6 321 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 DIRC3C9JPN6 131 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 HBE1P02100 147 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
SF1-207ENST00000413951 PRB4P10163 310 aaPredicted RBP11.94□□□□□ -0.5
SF1-207ENST00000413951 CSN1S1P47710 185 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 ZNF767PQ75MW2 155 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 NIPSNAP3BQ9BS92 247 aa11.94□□□□□ -0.5
SF1-207ENST00000413951 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
SF1-207ENST00000413951 IGHV3OR16-12A0A075B7B8 117 aa11.93□□□□□ -0.5
SF1-207ENST00000413951 IGKV2-40A0A087WW87 121 aaPredicted RBP11.93□□□□□ -0.5
SF1-207ENST00000413951 IGKV2D-40P01614 121 aaPredicted RBP11.93□□□□□ -0.5
SF1-207ENST00000413951 EMP1P54849 157 aa11.93□□□□□ -0.5
SF1-207ENST00000413951 LGALS9BQ3B8N2 356 aa11.93□□□□□ -0.5
SF1-207ENST00000413951 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
SF1-207ENST00000413951 AGPAT4-IT1Q9H0P7 198 aa11.93□□□□□ -0.5
SF1-207ENST00000413951 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
SF1-207ENST00000413951 CT45A10P0DMU9 189 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 SOHLH1Q5JUK2 328 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 CMTM2Q8TAZ6 248 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 VGLL1Q99990 258 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 PPP1R14DQ9NXH3 145 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
SF1-207ENST00000413951 TRBV7-9A0A0J9YWB2 115 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 TCRAP04437 139 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 PPT1P50897 306 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 UBE2G2P60604 165 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
SF1-207ENST00000413951 CCL20P78556 96 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 RRN3P1Q2M238 152 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 TCEAL7Q9BRU2 100 aa11.91□□□□□ -0.5
SF1-207ENST00000413951 A0A1B0GV50 99 aa11.9□□□□□ -0.5
SF1-207ENST00000413951 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
SF1-207ENST00000413951 M0R2Z0 102 aa11.9□□□□□ -0.5
SF1-207ENST00000413951 CRISP2P16562 243 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms