RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SMR3AQ99954 134 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 ZFHX3Q15911 3703 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 ACANP16112 2415 aa10.46□□□□□ -0.73
LIMS1-205ENST00000410093 LINC00587B1AMM8 73 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 IGLV1-40P01703 118 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.74
LIMS1-205ENST00000410093 PMCHP20382 165 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 KIAA1644Q3SXP7 199 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 GDF5OSQ5U4N7 250 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 ASCL2Q99929 193 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 MTORP42345 2549 aa10.46□□□□□ -0.74
LIMS1-205ENST00000410093 FLNAP21333 2647 aaKnown RBP10.45□□□□□ -0.74
LIMS1-205ENST00000410093 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 LY6G6DO95868 133 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 AMTP48728 403 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 CRIP1P50238 77 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF493Q6ZR52 646 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
LIMS1-205ENST00000410093 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
LIMS1-205ENST00000410093 A0A1B0GUS0 222 aa10.44□□□□□ -0.74
LIMS1-205ENST00000410093 SH2D1AO60880 128 aa10.44□□□□□ -0.74
LIMS1-205ENST00000410093 HSBP1O75506 76 aa10.44□□□□□ -0.74
LIMS1-205ENST00000410093 IGHG4P01861 327 aa10.44□□□□□ -0.74
LIMS1-205ENST00000410093 LY6EQ16553 131 aa10.44□□□□□ -0.74
LIMS1-205ENST00000410093 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.44□□□□□ -0.74
LIMS1-205ENST00000410093 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 K7EMT4 169 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 DEFA6Q01524 100 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 HIST1H1AQ02539 215 aaPredicted RBP10.43□□□□□ -0.74
LIMS1-205ENST00000410093 CFHR3Q02985 330 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 C9orf47Q6ZRZ4 202 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 Q6ZWC4 215 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 IGKV2-40A0A087WW87 121 aaPredicted RBP10.43□□□□□ -0.74
LIMS1-205ENST00000410093 F2Z2F3 143 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 IGKV2D-40P01614 121 aaPredicted RBP10.43□□□□□ -0.74
LIMS1-205ENST00000410093 DDTP30046 118 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 TMEM78Q5T7P6 136 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 CDPF1Q6NVV7 123 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 C8orf86Q6ZUL3 223 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 C8orf49Q96NF6 230 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
LIMS1-205ENST00000410093 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
LIMS1-205ENST00000410093 IGHV3-35A0A0C4DH35 117 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 FSHBP01225 129 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 PF4V1P10720 104 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 CTRLP40313 264 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 TEX43Q6ZNM6 134 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 NPFFR1Q9GZQ6 430 aa10.42□□□□□ -0.74
LIMS1-205ENST00000410093 TRBV7-9A0A0J9YWB2 115 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 TGFAP01135 160 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 AVPP01185 164 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF138P52744 262 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 FOXE3Q13461 319 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 LBHQ53QV2 105 aaPredicted RBP10.41□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 RCHY1Q96PM5 261 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 VGLL1Q99990 258 aa10.41□□□□□ -0.74
LIMS1-205ENST00000410093 SSBP4Q9BWG4 385 aaPredicted RBP10.41□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
LIMS1-205ENST00000410093 OVOL1O14753 267 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.74
LIMS1-205ENST00000410093 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.74
LIMS1-205ENST00000410093 BLCAPP62952 87 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 FAM106AQ4KMX7 169 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 GPHB5Q86YW7 130 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 MAPK1IP1LQ8NDC0 245 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 LINC00477Q96M19 166 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
LIMS1-205ENST00000410093 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.74
LIMS1-205ENST00000410093 TRAV8-2A0A0B4J237 113 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 KIR2DL5BA0A0G2JN68 375 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 KIR2DL5BA0A0G2JPC4 375 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 ARMS2P0C7Q2 107 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 KRTAP21-3Q3LHN1 58 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 NIT1Q86X76 327 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 KIR2DL5AQ8N109 375 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 C20orf144Q9BQM9 153 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
LIMS1-205ENST00000410093 M0R2Z0 102 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 LINC00614P0C842 121 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 IGHV4-31P0DP07 118 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 PSMB8P28062 276 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 LYZL1Q6UWQ5 148 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 Q6YL49 198 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 MRPL52Q86TS9 123 aaKnown RBP10.38□□□□□ -0.75
LIMS1-205ENST00000410093 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
LIMS1-205ENST00000410093 LINC00527Q9UJ94 153 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms