RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 F8WDY8 70 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 H3BTX0 84 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
EPHA4-202ENST00000409854 GNG5P63218 68 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 PSG9Q00887 426 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 CENPWQ5EE01 88 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 OR8I2Q8N0Y5 310 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 KLHDC1Q8N7A1 406 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
EPHA4-202ENST00000409854 CCDC168Q8NDH2 2452 aa4.21□□□□□ -1.73
EPHA4-202ENST00000409854 A0A1B0GW15 77 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 K7EN84 100 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 NDUFA7O95182 113 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 AMBPP02760 352 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 CNN1P51911 297 aaKnown RBP4.21□□□□□ -1.74
EPHA4-202ENST00000409854 VAMP3Q15836 100 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 NIT1Q86X76 327 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 EXOC3-AS1Q8N2X6 119 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 OCC1Q8TAD7 63 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 COX11Q9Y6N1 276 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 CUBNO60494 3623 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 LGALS9O00182 355 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 IGLV2-11P01706 119 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 GALR1P47211 349 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 GNG4P50150 75 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 PDZD11Q5EBL8 140 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 ANAPC16Q96DE5 110 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 FMC1Q96HJ9 113 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 CITED1Q99966 193 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.74
EPHA4-202ENST00000409854 MYO9AB2RTY4 2548 aa4.21□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV7-4-1A0A0J9YVY3 117 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 ISLRO14498 428 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 LTAP01374 205 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 FABP4P15090 132 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 TMEM75Q8N9X5 138 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 C4orf3Q8WVX3 66 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 TMEM18Q96B42 140 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 LINC00479Q96M42 142 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 JMJD8Q96S16 334 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 DAZ1Q9NQZ3 744 aaKnown RBP4.2□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV4OR15-8A0A075B7B6 117 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 A0A087WW49 117 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF207O43670 478 aaKnown RBP4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BKO60814 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BJP06899 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BOP23527 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BBP33778 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BDP58876 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BCP62807 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST2H2BEQ16778 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 FAM106AQ4KMX7 169 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BHQ93079 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BNQ99877 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 HIST1H2BMQ99879 126 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 SLC50A1Q9BRV3 221 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 MLST8Q9BVC4 326 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 AAMDCQ9H7C9 122 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 UFC1Q9Y3C8 167 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 A0A1W2PS18 150 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 SOCS3O14543 225 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 ELOBQ15370 118 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 Q86TA4 180 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 LINC01006Q8NI28 216 aa4.2□□□□□ -1.74
EPHA4-202ENST00000409854 MRPL53Q96EL3 112 aaKnown RBP4.2□□□□□ -1.74
EPHA4-202ENST00000409854 TRAV8-2A0A0B4J237 113 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 INAFM1C9JVW0 142 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 G3V4G9 280 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 CHEK1O14757 476 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 RPEL1Q2QD12 228 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 CMTM2Q8TAZ6 248 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 MRAP2Q96G30 205 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 GRAMD2BQ96HH9 432 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 IMMP2LQ96T52 175 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 TRAV26-1A0A087WT03 109 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV3-49A0A0A0MS15 119 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 RPS10P46783 165 aaKnown RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 CKS1BP61024 79 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 UBE2G1P62253 170 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 KLF5Q13887 457 aaPredicted RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 C8orf86Q6ZUL3 223 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 GBGT1Q8N5D6 347 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 FAM24BQ8N5W8 94 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 PYGO2Q9BRQ0 406 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 OSTCQ9NRP0 149 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 NOTCH3Q9UM47 2321 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV3OR16-13A0A075B7E8 117 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 IGHV3-74A0A0B4J1X5 117 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 RBAKDNA6NC62 111 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 FBLL1A6NHQ2 334 aaKnown RBP4.19□□□□□ -1.74
EPHA4-202ENST00000409854 ZNF785A8K8V0 405 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 H7BYZ3 331 aa4.19□□□□□ -1.74
EPHA4-202ENST00000409854 M0R3E3 92 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms