RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PF4P02776 101 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-204ENST00000409727 LINC00322Q6ZN03 302 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-204ENST00000409727 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
CHMP3-204ENST00000409727 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 CLEC5AQ9NY25 188 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 ZFP30Q9Y2G7 519 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
CHMP3-204ENST00000409727 ZNF705GA8MUZ8 300 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-204ENST00000409727 K7EQG2 157 aa9.35□□□□□ -0.91
CHMP3-204ENST00000409727 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-204ENST00000409727 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-204ENST00000409727 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
CHMP3-204ENST00000409727 KRTAP24-1Q3LI83 254 aa9.35□□□□□ -0.91
CHMP3-204ENST00000409727 TGIF2-C20orf24A0A0A6YYL0 155 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 PPP1R2P9O14990 202 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 SAP30O75446 220 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 FAM3BP58499 235 aaPredicted RBP9.34□□□□□ -0.91
CHMP3-204ENST00000409727 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
CHMP3-204ENST00000409727 TMEM78Q5T7P6 136 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 OR10J6PQ8NGY7 276 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 PRR25Q96S07 402 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 TUBA4BQ9H853 241 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 V9GYV3 84 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 CXorf65A6NEN9 183 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 COLCA2A8K830 154 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 CD33P20138 364 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 ELOBQ15370 118 aa9.34□□□□□ -0.91
CHMP3-204ENST00000409727 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
CHMP3-204ENST00000409727 J3KRW8 73 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 CXCL1P09341 107 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 CT45A10P0DMU9 189 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 S100PP25815 95 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 SAPCD1Q5SSQ6 148 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 NDFIP1Q9BT67 221 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
CHMP3-204ENST00000409727 A0A1W2PPQ1 181 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 GATCO43716 136 aaKnown RBP9.32□□□□□ -0.92
CHMP3-204ENST00000409727 P01737 135 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 ZNF138P52744 262 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 TCL1AP56279 114 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 OR8A1Q8NGG7 326 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 YPEL4Q96NS1 127 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 CITED1Q99966 193 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
CHMP3-204ENST00000409727 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 CRIP1P50238 77 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
CHMP3-204ENST00000409727 C19orf71A6NCJ1 209 aa9.31□□□□□ -0.92
CHMP3-204ENST00000409727 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
CHMP3-204ENST00000409727 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-204ENST00000409727 RPL19P84098 196 aaKnown RBP9.31□□□□□ -0.92
CHMP3-204ENST00000409727 KCNIP4Q6PIL6 250 aa9.31□□□□□ -0.92
CHMP3-204ENST00000409727 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
CHMP3-204ENST00000409727 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
CHMP3-204ENST00000409727 MAST4O15021 2626 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 SPINK4O60575 86 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 DEFB131AP59861 70 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 LINC00482Q8N8I6 264 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
CHMP3-204ENST00000409727 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 SH2D1AO60880 128 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 RAB5AP20339 215 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 ZNF124Q15973 351 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 FAM162BQ5T6X4 162 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 SPATA3Q8NHX4 192 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
CHMP3-204ENST00000409727 OR4C46A6NHA9 309 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 GZMBP10144 247 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 EBLN2Q6P2I7 272 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 SIGLEC8Q9NYZ4 499 aa9.29□□□□□ -0.92
CHMP3-204ENST00000409727 RPS10P46783 165 aaKnown RBP9.28□□□□□ -0.92
CHMP3-204ENST00000409727 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 PRR9Q5T870 116 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 Q6ZQT7 251 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 APRG1Q8IVJ8 170 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms