RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 LY96Q9Y6Y9 160 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 TNRC6BQ9UPQ9 1833 aaKnown RBP6.56□□□□□ -1.36
SNX13-201ENST00000409076 LY6DQ14210 128 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 OCIAD2Q56VL3 154 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 ZC2HC1BQ5TFG8 222 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 OR2K2Q8NGT1 345 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 NEU4Q8WWR8 484 aaPredicted RBP6.56□□□□□ -1.36
SNX13-201ENST00000409076 TRAV40A0A0B4J280 105 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 APOMO95445 188 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 C15orf32Q32M92 178 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 TEX36Q5VZQ5 186 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 ZNF418Q8TF45 676 aaPredicted RBP6.55□□□□□ -1.36
SNX13-201ENST00000409076 TMEM158Q8WZ71 300 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 ARPC1AQ92747 370 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 DPM3Q9P2X0 92 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 TRBV19A0A075B6N1 114 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 CDKN1BP46527 198 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 CRIP1P50238 77 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 RBPJQ06330 500 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 CDSNQ15517 529 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 PSG3Q16557 428 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 SMIM15Q7Z3B0 74 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 OR1N2Q8NGR9 330 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 SOX21Q9Y651 276 aaPredicted RBP6.55□□□□□ -1.36
SNX13-201ENST00000409076 PRRC2AP48634 2157 aaKnown RBP6.55□□□□□ -1.36
SNX13-201ENST00000409076 EPG5Q9HCE0 2579 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 A0A0G2JLM5 398 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 TRGV3P03979 118 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 RPL7P18124 248 aaKnown RBP6.55□□□□□ -1.36
SNX13-201ENST00000409076 APOBEC3AP31941 199 aaPredicted RBP6.55□□□□□ -1.36
SNX13-201ENST00000409076 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 MAPK1IP1LQ8NDC0 245 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 TRGV9Q99603 122 aa6.55□□□□□ -1.36
SNX13-201ENST00000409076 FNDC10F2Z333 226 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 ITGB1BP1O14713 200 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 Q6ZS92 163 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 ZNF491Q8N8L2 437 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 DUX5Q96PT3 197 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 PEF1Q9UBV8 284 aaKnown RBP6.54□□□□□ -1.36
SNX13-201ENST00000409076 UTP20O75691 2785 aaKnown RBP6.54□□□□□ -1.36
SNX13-201ENST00000409076 TMEM265A0A087WTH1 108 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 PSMB11A5LHX3 300 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 IGF1P05019 195 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 HIST1H1AQ02539 215 aaPredicted RBP6.54□□□□□ -1.36
SNX13-201ENST00000409076 FAM162BQ5T6X4 162 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 DYNAPQ8N1N2 210 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 MAP1LC3AQ9H492 121 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
SNX13-201ENST00000409076 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 K7ERU9 68 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
SNX13-201ENST00000409076 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
SNX13-201ENST00000409076 A6NDN8 102 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 K7EIM0 57 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 HBDP02042 147 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 VMO1Q7Z5L0 202 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 ITPR1Q14643 2758 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 PF4V1P10720 104 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 NPC2P61916 151 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 IGHV2-70DA0A0C4DH43 119 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 ESDP10768 282 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 GATA4P43694 442 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
SNX13-201ENST00000409076 POU2AF1Q16633 256 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 TMEM249Q2WGJ8 235 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 SH2D6Q7Z4S9 175 aa6.53□□□□□ -1.36
SNX13-201ENST00000409076 C14orf178Q8N769 122 aaPredicted RBP6.53□□□□□ -1.36
SNX13-201ENST00000409076 HIVEP2P31629 2446 aa6.52□□□□□ -1.36
SNX13-201ENST00000409076 CSMD2Q7Z408 3487 aa6.52□□□□□ -1.36
SNX13-201ENST00000409076 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 IGHV3-73A0A0B4J1V6 119 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 SHISA9B4DS77 424 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 FABP2P12104 132 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
SNX13-201ENST00000409076 TMEM78Q5T7P6 136 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 PET117Q6UWS5 81 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 SHANK2-AS3Q9BTD1 123 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 RNASE4P34096 147 aaKnown RBP6.52□□□□□ -1.37
SNX13-201ENST00000409076 FXYD2P54710 66 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 FAM231DQ6ZW35 169 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
SNX13-201ENST00000409076 CHCHD1Q96BP2 118 aaKnown RBP6.52□□□□□ -1.37
SNX13-201ENST00000409076 ZANQ9Y493 2812 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 IGKV3D-20A0A0C4DH25 116 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 A0A1B0GXF2 115 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 ASCL5Q7RTU5 278 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 ATP5L2Q7Z4Y8 100 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 RAB1BQ9H0U4 201 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms