RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 HMGB3O15347 200 aaKnown RBP5.99□□□□□ -1.45
USP16-202ENST00000399973 RANP62826 216 aaKnown RBP5.99□□□□□ -1.45
USP16-202ENST00000399973 BTN1A1Q13410 526 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 ZNF266Q14584 549 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 ACOT6Q3I5F7 207 aaPredicted RBP5.99□□□□□ -1.45
USP16-202ENST00000399973 TMEM78Q5T7P6 136 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 CCDC28AQ8IWP9 274 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 Q8TAT8 98 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 TMEM263Q8WUH6 116 aaKnown RBP5.99□□□□□ -1.45
USP16-202ENST00000399973 AQP10Q96PS8 301 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 C20orf144Q9BQM9 153 aa5.99□□□□□ -1.45
USP16-202ENST00000399973 PLAC8L1A1L4L8 177 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 C7orf71A4D174 169 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 SNURFLB1AK76 121 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
USP16-202ENST00000399973 CSN1S1P47710 185 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 Q5BKY6 102 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 INO80EQ8NBZ0 244 aaPredicted RBP5.98□□□□□ -1.45
USP16-202ENST00000399973 OR10G4Q8NGN3 311 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 OR10G9Q8NGN4 311 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 OR10G7Q8NGN6 311 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 OR2T35Q8NGX2 323 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 HYLS1Q96M11 299 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 Q9H3A6 140 aa5.98□□□□□ -1.45
USP16-202ENST00000399973 NOP10Q9NPE3 64 aaKnown RBP5.98□□□□□ -1.45
USP16-202ENST00000399973 F5H768 121 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 SLC25A5P05141 298 aaKnown RBP5.97□□□□□ -1.45
USP16-202ENST00000399973 GPX1P07203 203 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 M6PRP20645 277 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 RNASE4P34096 147 aaKnown RBP5.97□□□□□ -1.45
USP16-202ENST00000399973 CDC34P49427 236 aaPredicted RBP5.97□□□□□ -1.45
USP16-202ENST00000399973 OXA1LQ15070 435 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 IQCF2Q8IXL9 164 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 CMTM2Q8TAZ6 248 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 RNASE8Q8TDE3 154 aaKnown RBP5.97□□□□□ -1.45
USP16-202ENST00000399973 ASB13Q8WXK3 278 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 VGLL1Q99990 258 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 AGPAT4-IT1Q9H0P7 198 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 SH3BGRL3Q9H299 93 aa5.97□□□□□ -1.45
USP16-202ENST00000399973 TIMM8BQ9Y5J9 83 aaPredicted RBP5.97□□□□□ -1.45
USP16-202ENST00000399973 GAGE12BA1L429 117 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 RNF222A6NCQ9 220 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 CBY3A6NI87 242 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ARPC5O15511 151 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 GAGE7O76087 117 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ATP5G1P05496 136 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 GAGE12FP0CL80 117 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 GAGE12GP0CL81 117 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 GAGE12IP0CL82 117 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ARL14EPLP0DKL9 152 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 P0DMU3 169 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 FAM231AP0DMU4 169 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 FAM231CP0DMU5 169 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ATP6V0CP27449 155 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ATP5G3P48201 142 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ZNF138P52744 262 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 CD300CQ08708 224 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 FAM74A1Q5RGS3 127 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 PRR9Q5T870 116 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 PQLC2Q6ZP29 291 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 ZNF493Q6ZR52 646 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 C9orf47Q6ZRZ4 202 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 PYGO2Q9BRQ0 406 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 TNFSF18Q9UNG2 199 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.46
USP16-202ENST00000399973 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 BORCS7-ASMTA0A0B4J1R7 106 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 KLLNB2CW77 178 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 SMLR1H3BR10 107 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 RGS13O14921 159 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 RPL7L1Q6DKI1 246 aaKnown RBP5.95□□□□□ -1.46
USP16-202ENST00000399973 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 LYPD1Q8N2G4 141 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 ZNF680Q8NEM1 530 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 OR2G3Q8NGZ4 309 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 FAM210BQ96KR6 192 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 FAM19A4Q96LR4 140 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 ARPC5LQ9BPX5 153 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 PSMG3Q9BT73 122 aaPredicted RBP5.95□□□□□ -1.46
USP16-202ENST00000399973 ZNF492Q9P255 531 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 NACAE9PAV3 2078 aa5.95□□□□□ -1.46
USP16-202ENST00000399973 DNAH6Q9C0G6 4158 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 PGPA6NDG6 321 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 DIRC3C9JPN6 131 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 NUDT3O95989 172 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 CRISP2P16562 243 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 GNG5P63218 68 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 MUC21Q5SSG8 566 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 EIF4E3Q8N5X7 224 aaKnown RBP5.94□□□□□ -1.46
USP16-202ENST00000399973 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 RXFP4Q8TDU9 374 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 RAB24Q969Q5 203 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 GNPNAT1Q96EK6 184 aaPredicted RBP5.94□□□□□ -1.46
USP16-202ENST00000399973 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
USP16-202ENST00000399973 OTORQ9NRC9 128 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms