RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 VWC2Q2TAL6 325 aa13.27□□□□□ -0.29
COL11A2-204ENST00000395194 EXOC3-AS1Q8N2X6 119 aa13.27□□□□□ -0.29
COL11A2-204ENST00000395194 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.29
COL11A2-204ENST00000395194 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
COL11A2-204ENST00000395194 KLF12Q9Y4X4 402 aa13.27□□□□□ -0.29
COL11A2-204ENST00000395194 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.29
COL11A2-204ENST00000395194 H3BNG1 76 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 IGHV3-53P01767 116 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 STX12Q86Y82 276 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 TMEM252Q8N6L7 170 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 MRPL53Q96EL3 112 aaKnown RBP13.26□□□□□ -0.29
COL11A2-204ENST00000395194 AGPAT4-IT1Q9H0P7 198 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 GPN1Q9HCN4 374 aaPredicted RBP13.26□□□□□ -0.29
COL11A2-204ENST00000395194 FUT9Q9Y231 359 aa13.26□□□□□ -0.29
COL11A2-204ENST00000395194 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
COL11A2-204ENST00000395194 KLLNB2CW77 178 aa13.25□□□□□ -0.29
COL11A2-204ENST00000395194 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
COL11A2-204ENST00000395194 HIST1H1EP10412 219 aaKnown RBP13.25□□□□□ -0.29
COL11A2-204ENST00000395194 S100A11P31949 105 aa13.25□□□□□ -0.29
COL11A2-204ENST00000395194 LINC00315P59091 139 aa13.25□□□□□ -0.29
COL11A2-204ENST00000395194 PRR9Q5T870 116 aa13.25□□□□□ -0.29
COL11A2-204ENST00000395194 Q6ZQT7 251 aa13.25□□□□□ -0.29
COL11A2-204ENST00000395194 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
COL11A2-204ENST00000395194 A0A1W2PPQ1 181 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 ZNF324O75467 553 aaPredicted RBP13.24□□□□□ -0.29
COL11A2-204ENST00000395194 GPX1P07203 203 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 HBG1P69891 147 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 HBG2P69892 147 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 ICAM4Q14773 271 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 FAM122CQ6P4D5 195 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 SCRT2Q9NQ03 307 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 TMEM14CQ9P0S9 112 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
COL11A2-204ENST00000395194 MPDU1O75352 247 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 H2AFB2P0C5Z0 115 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 FUSP35637 526 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL11A2-204ENST00000395194 Q8N1X5 172 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 THAP6Q8TBB0 222 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 FAM19A4Q96LR4 140 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 LINC00477Q96M19 166 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 VGLL1Q99990 258 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 SLC25A2Q9BXI2 301 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 MRPL16Q9NX20 251 aaKnown RBP13.23□□□□□ -0.29
COL11A2-204ENST00000395194 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
COL11A2-204ENST00000395194 TCL1AP56279 114 aa13.22□□□□□ -0.29
COL11A2-204ENST00000395194 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
COL11A2-204ENST00000395194 MIR17HGQ75NE6 70 aa13.22□□□□□ -0.29
COL11A2-204ENST00000395194 NPCDR1Q9BY65 106 aa13.22□□□□□ -0.29
COL11A2-204ENST00000395194 RGS13O14921 159 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 SIVA1O15304 175 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 PAX4O43316 350 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 SPINK4O60575 86 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
COL11A2-204ENST00000395194 IL15RAQ13261 267 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 PDE6HQ13956 83 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 C9orf47Q6ZRZ4 202 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 ZFAND2AQ8N6M9 145 aa13.21□□□□□ -0.29
COL11A2-204ENST00000395194 NXPH4O95158 308 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 CRISP2P16562 243 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 NHLH2Q02577 135 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 ATP6V1FQ16864 119 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 Q8TAT8 98 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 CHAC2Q8WUX2 184 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 C18orf15Q96N68 181 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 ICOSQ9Y6W8 199 aa13.2□□□□□ -0.3
COL11A2-204ENST00000395194 IGHV1OR15-1A0A075B7D0 117 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 OR10J4P0C629 311 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 Q6ZRN7 208 aaPredicted RBP13.19□□□□□ -0.3
COL11A2-204ENST00000395194 ST6GAL2Q96JF0 529 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 FAM167A-AS1Q96KT0 104 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 ARPC5LQ9BPX5 153 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
COL11A2-204ENST00000395194 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
COL11A2-204ENST00000395194 SIX6O95475 246 aa13.18□□□□□ -0.3
COL11A2-204ENST00000395194 OR5C1Q8NGR4 320 aa13.18□□□□□ -0.3
COL11A2-204ENST00000395194 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
COL11A2-204ENST00000395194 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
COL11A2-204ENST00000395194 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
COL11A2-204ENST00000395194 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
COL11A2-204ENST00000395194 MUC21Q5SSG8 566 aa13.17□□□□□ -0.3
COL11A2-204ENST00000395194 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
COL11A2-204ENST00000395194 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
COL11A2-204ENST00000395194 OR51M1Q9H341 326 aa13.17□□□□□ -0.3
COL11A2-204ENST00000395194 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
COL11A2-204ENST00000395194 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
COL11A2-204ENST00000395194 NDUFA13Q9P0J0 144 aa13.16□□□□□ -0.3
COL11A2-204ENST00000395194 FAT1Q14517 4588 aa13.16□□□□□ -0.3
COL11A2-204ENST00000395194 PRAF2O60831 178 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 CRYBA4P53673 196 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 FXYD5Q96DB9 178 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 CCDC32Q9BV29 185 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 PRO0255Q9UI72 69 aa13.15□□□□□ -0.3
COL11A2-204ENST00000395194 E5RGE8 158 aa13.14□□□□□ -0.31
COL11A2-204ENST00000395194 OR7C2O60412 319 aa13.14□□□□□ -0.31
COL11A2-204ENST00000395194 NMBP08949 121 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms