RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SMIM9A6NGZ8 99 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 AMBPP02760 352 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 SPART-AS1P0CW21 52 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 HTN3P15516 51 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 BTN1A1Q13410 526 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 KHDC3LQ587J8 217 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 PRR9Q5T870 116 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 Q6ZQT7 251 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 SSX7Q7RTT5 188 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 C2CD4CQ8TF44 421 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 ASB13Q8WXK3 278 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 MRPL53Q96EL3 112 aaKnown RBP5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 HYLS1Q96M11 299 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 AGPAT4-IT1Q9H0P7 198 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 Q9H3A6 140 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 DKK2Q9UBU2 259 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 RPH3ALQ9UNE2 315 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 DNAH10Q8IVF4 4471 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 DEFB131BA0A096LNP1 70 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 TRAV10A0A0B4J240 114 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 A0A1W2PPV4 95 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM189A5PLL7 270 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 ARL14EPLP0DKL9 152 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 LEPP41159 167 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 CDC34P49427 236 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 TAS2R45P59539 299 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 GNG5P63218 68 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 CD300CQ08708 224 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 OR11H4Q8NGC9 324 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 OR2G3Q8NGZ4 309 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 NIPSNAP3BQ9BS92 247 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 PSMG3Q9BT73 122 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 CYTL1Q9NRR1 136 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 PRELID1Q9Y255 219 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
HMGB3P1-201ENST00000393368 IGHV4-4A0A075B6R2 117 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 C11orf94C9JXX5 98 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 H7BYZ3 331 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 STAG3L2P0CL84 134 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 STAG3L3P0CL85 134 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 TSPOP30536 169 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 RNASE4P34096 147 aaKnown RBP5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 TAS2R60P59551 318 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF726P1Q15940 193 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 C9orf47Q6ZRZ4 202 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 IQCF2Q8IXL9 164 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 RAB24Q969Q5 203 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 FAM19A4Q96LR4 140 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 ODF3Q96PU9 254 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
HMGB3P1-201ENST00000393368 BORCS7-ASMTA0A0B4J1R7 106 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 C7orf71A4D174 169 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 PGPA6NDG6 321 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 KLLNB2CW77 178 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 DIRC3C9JPN6 131 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 GCHFRP30047 84 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 CSN1S1P47710 185 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 DAD1P61803 113 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM78Q5T7P6 136 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM256Q8N2U0 113 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZFAND2AQ8N6M9 145 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 RNASE8Q8TDE3 154 aaKnown RBP5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 SGK494Q96LW2 274 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 LINC00477Q96M19 166 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 NOP10Q9NPE3 64 aaKnown RBP5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 OTORQ9NRC9 128 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF492Q9P255 531 aa5.44□□□□□ -1.54
HMGB3P1-201ENST00000393368 TRAV8-1A0A0A6YYK1 113 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 SLC25A5P05141 298 aaKnown RBP5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 GPX1P07203 203 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF138P52744 262 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 FGF8P55075 233 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 SERF2P84101 59 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 PQLC2Q6ZP29 291 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 GOLT1AQ6ZVE7 132 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 KCNRGQ8N5I3 272 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM263Q8WUH6 116 aaKnown RBP5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 GNPNAT1Q96EK6 184 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 ARPC5LQ9BPX5 153 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 C20orf144Q9BQM9 153 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 ACTR3CQ9C0K3 210 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
HMGB3P1-201ENST00000393368 GAGE12BA1L429 117 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GGTLC3B5MD39 225 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 F6UZH7 168 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF324O75467 553 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GAGE7O76087 117 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 MBP02144 154 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 CRISP2P16562 243 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 FHITP49789 147 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms