RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF672Q499Z4 452 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 LINC00322Q6ZN03 302 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 PPP1R17O96001 155 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 PRTN3P24158 256 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 PDE6HQ13956 83 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 RITA1Q96K30 269 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 GP9P14770 177 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 NUP37Q8NFH4 326 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 NEU4Q8WWR8 484 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 DLX4Q92988 240 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 A0A0G2JNJ9 132 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 LINC01559Q495D7 138 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 Q9UFV3 132 aa10.44□□□□□ -0.74
TRAPPC9-201ENST00000389328 DYSFO75923 2080 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 SPINK8P0C7L1 97 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 EIF4EBP1Q13541 118 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 TRAV21A0A0B4J279 112 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 CEACAM4O75871 244 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 SRD5A1P18405 259 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 VGLL1Q99990 258 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 EFNA4P52798 201 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
TRAPPC9-201ENST00000389328 H3BRN7 92 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 CD7P09564 240 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 LHBP01229 141 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 TEX36Q5VZQ5 186 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 ZNF491Q8N8L2 437 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 RNF5Q99942 180 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
TRAPPC9-201ENST00000389328 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 SH2D6Q7Z4S9 175 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 Q8N7P7 452 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 MSRB1Q9NZV6 116 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 NAV3Q8IVL0 2385 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 DTX2Q86UW9 622 aa10.41□□□□□ -0.74
TRAPPC9-201ENST00000389328 LINC01549A6NIU2 74 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 SIGLEC15Q6ZMC9 328 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 RAX2Q96IS3 184 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 KLF12Q9Y4X4 402 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 HCFC1P51610 2035 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 A0A1B0GXF2 115 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 E7EQL1 145 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 VMO1Q7Z5L0 202 aa10.4□□□□□ -0.74
TRAPPC9-201ENST00000389328 FXYD2P54710 66 aa10.4□□□□□ -0.75
TRAPPC9-201ENST00000389328 LOXL1Q08397 574 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC9-201ENST00000389328 CEND1Q8N111 149 aa10.4□□□□□ -0.75
TRAPPC9-201ENST00000389328 Q8N8P6 123 aa10.4□□□□□ -0.75
TRAPPC9-201ENST00000389328 PRRC2CQ9Y520 2896 aaKnown RBP10.4□□□□□ -0.75
TRAPPC9-201ENST00000389328 ANKHD1Q8IWZ3 2542 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 K7EM74 188 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 SIVA1O15304 175 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 IGKV1-17P01599 117 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 PIEZO1Q92508 2521 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 F8W1H4 67 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 TMEM190Q8WZ59 177 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 VCX2Q9H322 139 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 CTSZQ9UBR2 303 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 TRBV25-1A0A075B6N4 114 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 NPFFR1Q9GZQ6 430 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 FAM215AQ9Y5M1 114 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 CRXO43186 299 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 PAX1P15863 534 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 SLC25A16P16260 332 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 PAX8Q06710 450 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
TRAPPC9-201ENST00000389328 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 ERG28Q9UKR5 140 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 BRCA2P51587 3418 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
TRAPPC9-201ENST00000389328 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 ZFAND6Q6FIF0 208 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms