RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ARHGAP21Q5T5U3 1957 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 E7EUB6 86 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 LINC01619G3V211 115 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 H3BUA1 57 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 FOSL1P15407 271 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 SUMO2P61956 95 aaKnown RBP9.65□□□□□ -0.86
GABPB1-203ENST00000380877 CT83Q5H943 113 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 AMN1Q8IY45 258 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 C8orf49Q96NF6 230 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 SNAI2O43623 268 aa9.65□□□□□ -0.87
GABPB1-203ENST00000380877 HTN3P15516 51 aa9.65□□□□□ -0.87
GABPB1-203ENST00000380877 BRWD1-AS2P59051 145 aa9.65□□□□□ -0.87
GABPB1-203ENST00000380877 RNF114Q9Y508 228 aa9.65□□□□□ -0.87
GABPB1-203ENST00000380877 IGLV11-55A0A075B6I3 123 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 P0C879 139 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 RCHY1Q96PM5 261 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 TCF21O43680 179 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 TCTEX1D4Q5JR98 221 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-203ENST00000380877 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 V9GYV3 84 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
GABPB1-203ENST00000380877 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 C17orf77Q96MU5 243 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 DPH3P1Q9H4G8 78 aa9.64□□□□□ -0.87
GABPB1-203ENST00000380877 PRRC2CQ9Y520 2896 aaKnown RBP9.64□□□□□ -0.87
GABPB1-203ENST00000380877 TMEM95Q3KNT9 176 aa9.63□□□□□ -0.87
GABPB1-203ENST00000380877 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
GABPB1-203ENST00000380877 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-203ENST00000380877 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
GABPB1-203ENST00000380877 LMO4P61968 165 aa9.63□□□□□ -0.87
GABPB1-203ENST00000380877 TEX22C9J3V5 150 aa9.63□□□□□ -0.87
GABPB1-203ENST00000380877 COL5A1P20908 1838 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-203ENST00000380877 INS-IGF2F8WCM5 200 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
GABPB1-203ENST00000380877 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 IGKV1OR2-108A0A075B7D4 117 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 RPL35AP18077 110 aaKnown RBP9.62□□□□□ -0.87
GABPB1-203ENST00000380877 PATE2Q6UY27 113 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 IGHV7-4-1A0A0J9YVY3 117 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 NDUFA3O95167 84 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 MRPL27Q9P0M9 148 aaKnown RBP9.62□□□□□ -0.87
GABPB1-203ENST00000380877 TRAV9-2A0A087WT02 112 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 TYMSP04818 313 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
GABPB1-203ENST00000380877 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 VCX2Q9H322 139 aa9.62□□□□□ -0.87
GABPB1-203ENST00000380877 TMEM213A2RRL7 107 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 INSP01308 110 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 LOC102724200A0A096LPH7 203 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-203ENST00000380877 C5orf56Q8N8D9 126 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 CTSGP08311 255 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
GABPB1-203ENST00000380877 ERASQ7Z444 233 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 LY6G5BQ8NDX9 201 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 VGLL1Q99990 258 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
GABPB1-203ENST00000380877 KMT2EQ8IZD2 1858 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-203ENST00000380877 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
GABPB1-203ENST00000380877 EML5Q05BV3 1969 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 TRGV1A0A0A0MS02 117 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 H7C2G1 150 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 LAGE3Q14657 143 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
GABPB1-203ENST00000380877 PYY3Q5JQD4 70 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 COTL1Q14019 142 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
GABPB1-203ENST00000380877 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 DPM2O94777 84 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 CRYGCP07315 174 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
GABPB1-203ENST00000380877 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
GABPB1-203ENST00000380877 FSTL3O95633 263 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 A0A1B0GUS0 222 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 GP9P14770 177 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 A0A087WWL8 130 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 PLP1P60201 277 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 ABCA12Q86UK0 2595 aa9.59□□□□□ -0.87
GABPB1-203ENST00000380877 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms