RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SPINK4O60575 86 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 OR4E1P0C645 316 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 HIST1H1EP10412 219 aaKnown RBP9.62□□□□□ -0.87
PTCH1-202ENST00000375271 S100A5P33763 92 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 BCAP31P51572 246 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 TMBIM6P55061 237 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 C4orf46Q504U0 113 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 IBA57Q5T440 356 aaKnown RBP9.62□□□□□ -0.87
PTCH1-202ENST00000375271 TMEM78Q5T7P6 136 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 TRIM63Q969Q1 353 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
PTCH1-202ENST00000375271 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 VGLL1Q99990 258 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 PRELID1Q9Y255 219 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 H3BQ15 152 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 PRAF2O60831 178 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 ZNF253O75346 499 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 CRYBA4P53673 196 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 ERCC8Q13216 396 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 TMEM37Q8WXS4 190 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 SAT2Q96F10 170 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-202ENST00000375271 MGST2Q99735 147 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
PTCH1-202ENST00000375271 CRYGDP07320 174 aa9.6□□□□□ -0.87
PTCH1-202ENST00000375271 HAMPP81172 84 aa9.6□□□□□ -0.87
PTCH1-202ENST00000375271 CD300CQ08708 224 aa9.6□□□□□ -0.87
PTCH1-202ENST00000375271 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
PTCH1-202ENST00000375271 SRRQ9GZT4 340 aa9.6□□□□□ -0.87
PTCH1-202ENST00000375271 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 KLLNB2CW77 178 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 M0R3E3 92 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 ORM1P02763 201 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 CAV2P51636 162 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 MORN5Q5VZ52 161 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 MIC13Q5XKP0 118 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-202ENST00000375271 BLNKQ8WV28 456 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 SOSTQ9BQB4 213 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 SLIRPQ9GZT3 109 aaKnown RBP9.59□□□□□ -0.87
PTCH1-202ENST00000375271 C20orf85Q9H1P6 137 aa9.59□□□□□ -0.87
PTCH1-202ENST00000375271 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 TRAV5A0A0B4J249 113 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 NAP1L6A6NFF2 107 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 C9JCJ5 164 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 GYPEP15421 78 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 BAXQ07812 192 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 GPN1Q9HCN4 374 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-202ENST00000375271 UQCC1Q9NVA1 299 aa9.58□□□□□ -0.88
PTCH1-202ENST00000375271 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
PTCH1-202ENST00000375271 FLG2Q5D862 2391 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-202ENST00000375271 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
PTCH1-202ENST00000375271 CENPXA8MT69 81 aa9.57□□□□□ -0.88
PTCH1-202ENST00000375271 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
PTCH1-202ENST00000375271 NMBP08949 121 aa9.57□□□□□ -0.88
PTCH1-202ENST00000375271 PVALBP20472 110 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-202ENST00000375271 PPT1P50897 306 aa9.57□□□□□ -0.88
PTCH1-202ENST00000375271 PDE6HQ13956 83 aa9.57□□□□□ -0.88
PTCH1-202ENST00000375271 MRPL32Q9BYC8 188 aaKnown RBP9.57□□□□□ -0.88
PTCH1-202ENST00000375271 LSM5Q9Y4Y9 91 aaKnown RBP9.57□□□□□ -0.88
PTCH1-202ENST00000375271 UBE2L5PA0A1B0GUS4 154 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 K7EQD1 137 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 NDUFB6O95139 128 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 ARL16Q0P5N6 197 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 FHL2Q14192 279 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 SPANXN2Q5MJ10 180 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 FAM122CQ6P4D5 195 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 SLC39A9Q9NUM3 307 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 TP53TG3Q9ULZ0 132 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 FAT1Q14517 4588 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 VPS13BQ7Z7G8 4022 aa9.56□□□□□ -0.88
PTCH1-202ENST00000375271 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-202ENST00000375271 CCDC160A6NGH7 325 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 H3BMQ9 156 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 CST7O76096 145 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-202ENST00000375271 CRISP2P16562 243 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 STX12Q86Y82 276 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 EXOC3-AS1Q8N2X6 119 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 SLC25A31Q9H0C2 315 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 TMEM14CQ9P0S9 112 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 FLVCR2Q9UPI3 526 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 V9GYH0 126 aa9.55□□□□□ -0.88
PTCH1-202ENST00000375271 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
PTCH1-202ENST00000375271 TRGV11A0A075B6L2 103 aa9.54□□□□□ -0.88
PTCH1-202ENST00000375271 MBPP02686 304 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-202ENST00000375271 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms