RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 CCL17Q92583 94 aa9.71□□□□□ -0.86
TRERF1-202ENST00000354325 ACACBO00763 2458 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 MYMXA0A1B0GTQ4 84 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 ZNRD1Q9P1U0 126 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 TRAV40A0A0B4J280 105 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 A8MWV9 139 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 ARL3P36405 182 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 CLUHP3Q96NS8 147 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 SCGB1C2P0DMR2 95 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
TRERF1-202ENST00000354325 PHLDA1Q8WV24 401 aaPredicted RBP9.7□□□□□ -0.86
TRERF1-202ENST00000354325 IGHV3-72A0A0B4J1Y9 119 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 PPP1R17O96001 155 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 APELAP0DMC3 54 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 DUX4L9Q6RFH8 374 aaPredicted RBP9.69□□□□□ -0.86
TRERF1-202ENST00000354325 K7EMI3 77 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 NUP37Q8NFH4 326 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 TRIOO75962 3097 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 F8VRH5 84 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 PSMB2P49721 201 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 CCL8P80075 99 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 MRPL35Q9NZE8 188 aaKnown RBP9.69□□□□□ -0.86
TRERF1-202ENST00000354325 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
TRERF1-202ENST00000354325 ZNF785A8K8V0 405 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 I3L2K1 104 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 M0R3E3 92 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 CD40P25942 277 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 WI2-2373I1.2A0A1W2PRP0 233 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 C17orf100A8MU93 164 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 CLEC3BP05452 202 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 IGHV1-8P0DP01 117 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 TLN1Q9Y490 2541 aaKnown RBP9.68□□□□□ -0.86
TRERF1-202ENST00000354325 ATRXP46100 2492 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 MBD3L4A6NDZ8 208 aaPredicted RBP9.68□□□□□ -0.86
TRERF1-202ENST00000354325 MBD3L3A6NE82 208 aaPredicted RBP9.68□□□□□ -0.86
TRERF1-202ENST00000354325 MBD3L5A6NJ08 208 aaPredicted RBP9.68□□□□□ -0.86
TRERF1-202ENST00000354325 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
TRERF1-202ENST00000354325 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
TRERF1-202ENST00000354325 NDUFA3O95167 84 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 IGKV1-17P01599 117 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 SLC25A16P16260 332 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 CRIP1P50238 77 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 ZNF491Q8N8L2 437 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 SCGB3A1Q96QR1 104 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 FBXL15Q9H469 300 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 IGKV2D-26A0A0A0MRZ7 120 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 GAGE5Q13069 117 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 GAGE6Q13070 117 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 FOXE3Q13461 319 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 TMEM155Q4W5P6 130 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
TRERF1-202ENST00000354325 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
TRERF1-202ENST00000354325 WT1P19544 449 aaPredicted RBP9.66□□□□□ -0.86
TRERF1-202ENST00000354325 RITA1Q96K30 269 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 NOTCH3Q9UM47 2321 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 TANC2Q9HCD6 1990 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 SNCGO76070 127 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 PAX8Q06710 450 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 SPRNQ5BIV9 151 aa9.66□□□□□ -0.86
TRERF1-202ENST00000354325 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
TRERF1-202ENST00000354325 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
TRERF1-202ENST00000354325 TMEM178BH3BS89 294 aa9.65□□□□□ -0.86
TRERF1-202ENST00000354325 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
TRERF1-202ENST00000354325 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
TRERF1-202ENST00000354325 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
TRERF1-202ENST00000354325 ZNF688P0C7X2 276 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 ASIPP42127 132 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 C17orf77Q96MU5 243 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 ERG28Q9UKR5 140 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 NOTCH2Q04721 2471 aa9.65□□□□□ -0.87
TRERF1-202ENST00000354325 ZNF815PA8K554 130 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 TEX22C9J3V5 150 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 CRYGBP07316 175 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 C5orf64Q2M2E5 130 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 DTX2Q86UW9 622 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 KAAG1Q9UBP8 84 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 DOPEY2Q9Y3R5 2298 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 Q6ZUT4 128 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 XIRP2A4UGR9 3374 aa9.64□□□□□ -0.87
TRERF1-202ENST00000354325 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
TRERF1-202ENST00000354325 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
TRERF1-202ENST00000354325 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
TRERF1-202ENST00000354325 GAGE2EQ4V326 116 aa9.63□□□□□ -0.87
TRERF1-202ENST00000354325 HIF1ANQ9NWT6 349 aa9.63□□□□□ -0.87
TRERF1-202ENST00000354325 GAGE2DQ9UEU5 116 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms