RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IGKV3-20P01619 116 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 CT45A10P0DMU9 189 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 HLA-DRB4P13762 266 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 EBLN2Q6P2I7 272 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 C9orf47Q6ZRZ4 202 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 OR10J6PQ8NGY7 276 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 TVP23CQ96ET8 276 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 PARLQ9H300 379 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 SMDT1Q9H4I9 107 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 PSG8Q9UQ74 426 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 HLA-DRB4X5D2U9 266 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.17
CHMP4A-201ENST00000347519 TMEM183BQ1AE95 376 aa14.02□□□□□ -0.17
CHMP4A-201ENST00000347519 UQCC3Q6UW78 93 aa14.02□□□□□ -0.17
CHMP4A-201ENST00000347519 TMEM75Q8N9X5 138 aa14.02□□□□□ -0.17
CHMP4A-201ENST00000347519 TRBV20OR9-2A0A075B6H5 130 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 SERTM2A0A1B0GWG4 89 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 A8MTW9 85 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 FLI1Q01543 452 aaPredicted RBP14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 ZNF674Q2M3X9 581 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 OR4B1Q8NGF8 309 aa14.01□□□□□ -0.17
CHMP4A-201ENST00000347519 PRB2P02812 416 aaPredicted RBP14□□□□□ -0.17
CHMP4A-201ENST00000347519 SFTA3P0C7M3 94 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 AMTNQ6UX39 209 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 Q86TA4 180 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 IGF2BP2-AS1Q96M15 143 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 ZNF492Q9P255 531 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 MGAM2Q2M2H8 2515 aa14□□□□□ -0.17
CHMP4A-201ENST00000347519 TRBV6-1A0A0K0K1D8 114 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 K7EQM0 130 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 DUSP14O95147 198 aaKnown RBP13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 ZNF138P52744 262 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 TRPT1Q86TN4 253 aaKnown RBP13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 FMC1Q96HJ9 113 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 FAM19A4Q96LR4 140 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 LINC00477Q96M19 166 aa13.99□□□□□ -0.17
CHMP4A-201ENST00000347519 TMEM218A2RU14 115 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 PGPEP1LA6NFU8 196 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 ADCYAP1P18509 176 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 UBE2G1P62253 170 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 NDUFA5Q16718 116 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 CENPWQ5EE01 88 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 C8orf49Q96NF6 230 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
CHMP4A-201ENST00000347519 IGLV2-8P01709 118 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 RPL35AP18077 110 aaKnown RBP13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 FXYD7P58549 80 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 TAS2R60P59551 318 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 KIR3DS1Q14943 382 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 STHQ8IWL8 128 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 NHLRC2Q8NBF2 726 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 ZMAT5Q9UDW3 170 aaKnown RBP13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 NOTCH1P46531 2555 aa13.97□□□□□ -0.17
CHMP4A-201ENST00000347519 ZNF727A8MUV8 499 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 LTAP01374 205 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 S100A9P06702 114 aaKnown RBP13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 SOHLH1Q5JUK2 328 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 PRR9Q5T870 116 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 SMIM7Q9BQ49 75 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 AURKAIP1Q9NWT8 199 aaPredicted RBP13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 PPP1R14DQ9NXH3 145 aa13.96□□□□□ -0.17
CHMP4A-201ENST00000347519 BAGE2Q86Y30 109 aa13.96□□□□□ -0.18
CHMP4A-201ENST00000347519 ZFAND2AQ8N6M9 145 aa13.96□□□□□ -0.18
CHMP4A-201ENST00000347519 J3KRW8 73 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 M0R2Z0 102 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 IGHV4-30-4P0DP06 118 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 SPINK13Q1W4C9 94 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 CLUHP3Q96NS8 147 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 MLST8Q9BVC4 326 aa13.95□□□□□ -0.18
CHMP4A-201ENST00000347519 MEGF8Q7Z7M0 2845 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 FBLL1A6NHQ2 334 aaKnown RBP13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 C9JCJ5 164 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 GIG44P09565 113 aaPredicted RBP13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 CRISP2P16562 243 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 GNG4P50150 75 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 Q6ZQT7 251 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 OCC1Q8TAD7 63 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 ODF3Q96PU9 254 aa13.94□□□□□ -0.18
CHMP4A-201ENST00000347519 TRAV12-2A0A075B6T6 113 aa13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 K7EIL1 84 aa13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 ZNF80P51504 273 aaPredicted RBP13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 ZC2HC1AQ96GY0 325 aa13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 ZFP30Q9Y2G7 519 aa13.93□□□□□ -0.18
CHMP4A-201ENST00000347519 F8W036 122 aa13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 K7EN84 100 aa13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 CRXO43186 299 aaPredicted RBP13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 CRIP1P50238 77 aa13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 FAM74A3Q4VXF1 159 aa13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
CHMP4A-201ENST00000347519 KLLNB2CW77 178 aa13.91□□□□□ -0.18
CHMP4A-201ENST00000347519 LEPP41159 167 aa13.91□□□□□ -0.18
CHMP4A-201ENST00000347519 BTN1A1Q13410 526 aa13.91□□□□□ -0.18
CHMP4A-201ENST00000347519 SAPCD1Q5SSQ6 148 aa13.91□□□□□ -0.18
CHMP4A-201ENST00000347519 C10orf91Q5T1B1 145 aa13.91□□□□□ -0.18
CHMP4A-201ENST00000347519 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms