RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PRTN3P24158 256 aa14.71□□□□□ -0.05
PSPC1-201ENST00000338910 TCTAP57738 103 aa14.71□□□□□ -0.06
PSPC1-201ENST00000338910 Q6AWC8 147 aa14.71□□□□□ -0.06
PSPC1-201ENST00000338910 U3KQK5 164 aa14.71□□□□□ -0.06
PSPC1-201ENST00000338910 LOC389332A0A1B0GUA5 103 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 D6R8Y8 96 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 EFNA4P52798 201 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 TMEM75Q8N9X5 138 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 SLC25A39Q9BZJ4 359 aaPredicted RBP14.7□□□□□ -0.06
PSPC1-201ENST00000338910 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 TEX22C9J3V5 150 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 CRIP1P50238 77 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 PAX8Q06710 450 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 PCP2Q8IVA1 136 aa14.7□□□□□ -0.06
PSPC1-201ENST00000338910 CNIH1O95406 144 aa14.69□□□□□ -0.06
PSPC1-201ENST00000338910 LYZP61626 148 aa14.69□□□□□ -0.06
PSPC1-201ENST00000338910 VMO1Q7Z5L0 202 aa14.69□□□□□ -0.06
PSPC1-201ENST00000338910 BBC3Q96PG8 261 aaPredicted RBP14.69□□□□□ -0.06
PSPC1-201ENST00000338910 ASCL2Q99929 193 aa14.69□□□□□ -0.06
PSPC1-201ENST00000338910 HES1Q14469 280 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 ZNF414Q96IQ9 312 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 RNF5Q99942 180 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 TPPP3Q9BW30 176 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 PRSS57Q6UWY2 283 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 CFHR4Q92496 578 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 PRELID3AQ96N28 172 aa14.68□□□□□ -0.06
PSPC1-201ENST00000338910 HBDP02042 147 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 PSG8Q9UQ74 426 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 F11RQ9Y624 299 aaKnown RBP14.67□□□□□ -0.06
PSPC1-201ENST00000338910 ODF3BA8MYP8 253 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 FABP2P12104 132 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 FAM104BQ5XKR9 115 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 LRRK2Q5S007 2527 aa14.67□□□□□ -0.06
PSPC1-201ENST00000338910 NMUP48645 174 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 FXYD7P58549 80 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 ORMDL3Q8N138 153 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 IFI27L1Q96BM0 104 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 TRBV19A0A075B6N1 114 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 NBR2O15453 112 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 AMN1Q8IY45 258 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 DYNAPQ8N1N2 210 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 TMEM190Q8WZ59 177 aa14.66□□□□□ -0.06
PSPC1-201ENST00000338910 FAM208BQ5VWN6 2430 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 SERTM2A0A1B0GWG4 89 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 TMEM213A2RRL7 107 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 PSG3Q16557 428 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 SAMD5Q5TGI4 173 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 C17orf77Q96MU5 243 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 BPESC1Q9GZL8 116 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 SIGLEC15Q6ZMC9 328 aa14.65□□□□□ -0.06
PSPC1-201ENST00000338910 SAMD13Q5VXD3 122 aa14.64□□□□□ -0.07
PSPC1-201ENST00000338910 C1orf122Q6ZSJ8 110 aa14.64□□□□□ -0.07
PSPC1-201ENST00000338910 CENPEQ02224 2701 aa14.64□□□□□ -0.07
PSPC1-201ENST00000338910 LYZL1Q6UWQ5 148 aa14.64□□□□□ -0.07
PSPC1-201ENST00000338910 TMEM189A5PLL7 270 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 K7EQM0 130 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 SMIM13P0DJ93 91 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 CT45A10P0DMU9 189 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 PRB4P10163 310 aaPredicted RBP14.63□□□□□ -0.07
PSPC1-201ENST00000338910 MRPL51Q4U2R6 128 aaKnown RBP14.63□□□□□ -0.07
PSPC1-201ENST00000338910 CSMD2Q7Z408 3487 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 TEX48A0A1B0GUV7 120 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 TM4SF20Q53R12 229 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 PIFOQ8TCI5 191 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 DKK2Q9UBU2 259 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 CELSR2Q9HCU4 2923 aa14.63□□□□□ -0.07
PSPC1-201ENST00000338910 IGHV4-39P01824 125 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 NCBP2LA6PVI3 153 aaKnown RBP14.62□□□□□ -0.07
PSPC1-201ENST00000338910 FXYD2P54710 66 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
PSPC1-201ENST00000338910 LYPD1Q8N2G4 141 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 NPBQ8NG41 125 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 C8orf49Q96NF6 230 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 SIRPDQ9H106 197 aa14.62□□□□□ -0.07
PSPC1-201ENST00000338910 FCGR2BP31994 310 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-201ENST00000338910 SHANK2-AS3Q9BTD1 123 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 WI2-2373I1.2A0A1W2PRP0 233 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 GNG7O60262 68 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 NDUFA3O95167 84 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 IGKV1-17P01599 117 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 LMO4P61968 165 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 KLF17Q5JT82 389 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-201ENST00000338910 RASL11BQ9BPW5 248 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 HIGD1BQ9P298 99 aa14.61□□□□□ -0.07
PSPC1-201ENST00000338910 UBR5O95071 2799 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-201ENST00000338910 I3L2K1 104 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 NPYP01303 97 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 C5orf64Q2M2E5 130 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 CCDC144NLQ6NUI1 221 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 BCL6BQ8N143 479 aaPredicted RBP14.6□□□□□ -0.07
PSPC1-201ENST00000338910 CLUHP3Q96NS8 147 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 H3BRN7 92 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 GCSHP23434 173 aa14.6□□□□□ -0.07
PSPC1-201ENST00000338910 TMSB15BA0A087X1C1 80 aa14.59□□□□□ -0.07
PSPC1-201ENST00000338910 M0R3E3 92 aa14.59□□□□□ -0.07
PSPC1-201ENST00000338910 SCGB1A1P11684 91 aa14.59□□□□□ -0.07
PSPC1-201ENST00000338910 PHLDA1Q8WV24 401 aaPredicted RBP14.59□□□□□ -0.07
PSPC1-201ENST00000338910 C18orf15Q96N68 181 aa14.59□□□□□ -0.07
PSPC1-201ENST00000338910 CCL19Q99731 98 aa14.59□□□□□ -0.07
PSPC1-201ENST00000338910 VGLL1Q99990 258 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms