RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 KIAA1671Q9BY89 1806 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 BAALCQ8WXS3 180 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 KIR2DL5BA0A0G2JN68 375 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 KIR2DL5BA0A0G2JPC4 375 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 SMKR1H3BMG3 65 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 KIR2DL5AQ8N109 375 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-201ENST00000335551 LHFPL1Q86WI0 220 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 TEN1Q86WV5 123 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 BMPERQ8N8U9 685 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 J3QRE1 110 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF561-AS1K7EIQ3 104 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 PFN1P07737 140 aaKnown RBP5.05□□□□□ -1.6
CSMD1-201ENST00000335551 HERVK_113P63121 156 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 IGFBPL1Q8WX77 278 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 SPANXB1Q9NS25 103 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-201ENST00000335551 FAM223BA6NKX1 122 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 MRPL14Q6P1L8 145 aaKnown RBP5.05□□□□□ -1.6
CSMD1-201ENST00000335551 C2orf66Q6UXQ4 117 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 LINC00114Q6XXX2 140 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 FAM223AQ8IWN6 122 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 TRBV25-1A0A075B6N4 114 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 PKD1L2Q7Z442 2459 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 Q8TAT8 98 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 PRSS22Q9GZN4 317 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 J3QQQ9 107 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 A0A087WWL8 130 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 A0A0B4J2C4 111 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 MUSTN1Q8IVN3 82 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 TIMM23O14925 209 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 CTSBP07858 339 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 RNF114Q9Y508 228 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 CFHR2P36980 270 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 PRB3Q04118 309 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-201ENST00000335551 C12orf74Q32Q52 190 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF493Q6ZR52 646 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 FAM231DQ6ZW35 169 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 U3KQE9 123 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 FN1P02751 2386 aaKnown RBP5.04□□□□□ -1.6
CSMD1-201ENST00000335551 DUX4L9Q6RFH8 374 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-201ENST00000335551 CHCHD2Q9Y6H1 151 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV3OR16-10A0A075B7F0 116 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 IGLL1P15814 213 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 STPG1Q5TH74 334 aa5.04□□□□□ -1.6
CSMD1-201ENST00000335551 C17orf100A8MU93 164 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 OOSP1A8MZH6 123 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 POLQO75417 2590 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 NTN3O00634 580 aaPredicted RBP5.03□□□□□ -1.6
CSMD1-201ENST00000335551 CCL25O15444 150 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 ARMS2P0C7Q2 107 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 PSMB8P28062 276 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 DEFB125Q8N687 156 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 CFHR4Q92496 578 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 SHANK2-AS3Q9BTD1 123 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
CSMD1-201ENST00000335551 C1QCP02747 245 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 TINCRA0A1B0GVN0 87 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 RNASE2P10153 161 aaKnown RBP5.03□□□□□ -1.6
CSMD1-201ENST00000335551 WFDC12Q8WWY7 111 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 TRBV6-6A0A0A6YYG2 114 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 TIAF1O95411 115 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
CSMD1-201ENST00000335551 HS3ST6Q96QI5 342 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 SLC22A18ASQ8N1D0 253 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 THBDP07204 575 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 SMIM10L1P0DMW3 83 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 SMIM10Q96HG1 83 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 MRPS18CQ9Y3D5 142 aaKnown RBP5.03□□□□□ -1.6
CSMD1-201ENST00000335551 Q6ZS49 121 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 C7orf69Q9H7B7 122 aa5.03□□□□□ -1.6
CSMD1-201ENST00000335551 C8orf31Q8N9H6 132 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-201ENST00000335551 A0A0A6YYD4 124 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 CFC1P0CG37 223 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 PSG7Q13046 419 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 GAS1P54826 345 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 TFF2Q03403 129 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 AMTNQ6UX39 209 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 A0A1B0GUS0 222 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 RHOHQ15669 191 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 WBP1Q96G27 269 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 MCRIP2Q9BUT9 160 aaKnown RBP5.02□□□□□ -1.61
CSMD1-201ENST00000335551 SPTBN4Q9H254 2564 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 A0A1W2PRX2 142 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 NDUFB8O95169 186 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 SEC61GP60059 68 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 C4orf51C9J302 202 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 C20orf78Q9BR46 151 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 IGKV1D-8A0A087WSZ0 117 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 MINOS1Q5TGZ0 78 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 MINOS1-NBL1R4GNA1 71 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 IGKV1-9A0A0C4DH69 117 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 Q6ZVH6 145 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 PYGO2Q9BRQ0 406 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms