RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C9orf47Q6ZRZ4 202 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 TMEM75Q8N9X5 138 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 PRR25Q96S07 402 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 DNAH3Q8TD57 4116 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 TRBV20OR9-2A0A075B6H5 130 aa15.91■□□□□ 0.14
TPM1-204ENST00000334895 CNN1P51911 297 aaKnown RBP15.91■□□□□ 0.14
TPM1-204ENST00000334895 ACTL10Q5JWF8 245 aa15.91■□□□□ 0.14
TPM1-204ENST00000334895 Q8N1Y9 231 aa15.91■□□□□ 0.14
TPM1-204ENST00000334895 OR10J6PQ8NGY7 276 aa15.91■□□□□ 0.14
TPM1-204ENST00000334895 Q8TAT8 98 aa15.91■□□□□ 0.14
TPM1-204ENST00000334895 TMEM218A2RU14 115 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 K7EQM0 130 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 HLA-DRB4P13762 266 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 ADCYAP1P18509 176 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 GTSCR1Q86UQ5 136 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 PSG8Q9UQ74 426 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 HLA-DRB4X5D2U9 266 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 FLI1Q01543 452 aaPredicted RBP15.9■□□□□ 0.14
TPM1-204ENST00000334895 ZNF674Q2M3X9 581 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 EBLN2Q6P2I7 272 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 Q86TA4 180 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 FMC1Q96HJ9 113 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 IGF2BP2-AS1Q96M15 143 aa15.9■□□□□ 0.14
TPM1-204ENST00000334895 H3BMM0 161 aa15.89■□□□□ 0.13
TPM1-204ENST00000334895 CT45A10P0DMU9 189 aa15.89■□□□□ 0.13
TPM1-204ENST00000334895 DEFB125Q8N687 156 aa15.89■□□□□ 0.13
TPM1-204ENST00000334895 TVP23CQ96ET8 276 aa15.89■□□□□ 0.13
TPM1-204ENST00000334895 TRBV6-1A0A0K0K1D8 114 aa15.88■□□□□ 0.13
TPM1-204ENST00000334895 UBE2G1P62253 170 aa15.88■□□□□ 0.13
TPM1-204ENST00000334895 SOHLH1Q5JUK2 328 aa15.88■□□□□ 0.13
TPM1-204ENST00000334895 PRNTQ86SH4 94 aa15.88■□□□□ 0.13
TPM1-204ENST00000334895 ZNF492Q9P255 531 aa15.88■□□□□ 0.13
TPM1-204ENST00000334895 RBMY1BA6NDE4 496 aaKnown RBP15.87■□□□□ 0.13
TPM1-204ENST00000334895 RBMY1EA6NEQ0 496 aaKnown RBP15.87■□□□□ 0.13
TPM1-204ENST00000334895 A8MTW9 85 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 RBMY1DP0C7P1 496 aaKnown RBP15.87■□□□□ 0.13
TPM1-204ENST00000334895 TAS2R60P59551 318 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 CENPWQ5EE01 88 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 TMEM78Q5T7P6 136 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 LINC00477Q96M19 166 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 SMIM7Q9BQ49 75 aa15.87■□□□□ 0.13
TPM1-204ENST00000334895 ZNF727A8MUV8 499 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 LTAP01374 205 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 IGKV3-20P01619 116 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 S100A9P06702 114 aaKnown RBP15.86■□□□□ 0.13
TPM1-204ENST00000334895 ZNF138P52744 262 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 AMTNQ6UX39 209 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 OR4B1Q8NGF8 309 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 FAM19A4Q96LR4 140 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 PPP1R14DQ9NXH3 145 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 PGPEP1LA6NFU8 196 aa15.86■□□□□ 0.13
TPM1-204ENST00000334895 FBLL1A6NHQ2 334 aaKnown RBP15.86■□□□□ 0.13
TPM1-204ENST00000334895 DUSP14O95147 198 aaKnown RBP15.86■□□□□ 0.13
TPM1-204ENST00000334895 C9JCJ5 164 aa15.85■□□□□ 0.13
TPM1-204ENST00000334895 IGLV2-8P01709 118 aa15.85■□□□□ 0.13
TPM1-204ENST00000334895 KPRPQ5T749 579 aaPredicted RBP15.85■□□□□ 0.13
TPM1-204ENST00000334895 TRPT1Q86TN4 253 aaKnown RBP15.85■□□□□ 0.13
TPM1-204ENST00000334895 NHLRC2Q8NBF2 726 aa15.85■□□□□ 0.13
TPM1-204ENST00000334895 GNG4P50150 75 aa15.84■□□□□ 0.13
TPM1-204ENST00000334895 BAGE2Q86Y30 109 aa15.84■□□□□ 0.13
TPM1-204ENST00000334895 C8orf49Q96NF6 230 aa15.84■□□□□ 0.13
TPM1-204ENST00000334895 FAM74A3Q4VXF1 159 aa15.83■□□□□ 0.13
TPM1-204ENST00000334895 STHQ8IWL8 128 aa15.83■□□□□ 0.13
TPM1-204ENST00000334895 MLST8Q9BVC4 326 aa15.83■□□□□ 0.13
TPM1-204ENST00000334895 F8W036 122 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 C10orf91Q5T1B1 145 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 ZFAND2AQ8N6M9 145 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 CLUHP3Q96NS8 147 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 SEC11CQ9BY50 192 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 AURKAIP1Q9NWT8 199 aaPredicted RBP15.83■□□□□ 0.12
TPM1-204ENST00000334895 ZFP30Q9Y2G7 519 aa15.83■□□□□ 0.12
TPM1-204ENST00000334895 KIR3DS1Q14943 382 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 PRR9Q5T870 116 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 TMEM183AQ8IXX5 376 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 ODF3Q96PU9 254 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 SRD5A3Q9H8P0 318 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 LENEPQ9Y5L5 61 aa15.82■□□□□ 0.12
TPM1-204ENST00000334895 OCC1Q8TAD7 63 aa15.81■□□□□ 0.12
TPM1-204ENST00000334895 K7EN84 100 aa15.8■□□□□ 0.12
TPM1-204ENST00000334895 CRISP2P16562 243 aa15.8■□□□□ 0.12
TPM1-204ENST00000334895 SAPCD1Q5SSQ6 148 aa15.8■□□□□ 0.12
TPM1-204ENST00000334895 COX8CQ7Z4L0 72 aa15.8■□□□□ 0.12
TPM1-204ENST00000334895 ZC2HC1AQ96GY0 325 aa15.8■□□□□ 0.12
TPM1-204ENST00000334895 TRBV7-9A0A0J9YWB2 115 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 M0R2Z0 102 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 RPL35AP18077 110 aaKnown RBP15.79■□□□□ 0.12
TPM1-204ENST00000334895 FXYD7P58549 80 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 SPINK13Q1W4C9 94 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 TMEM241Q24JQ0 296 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 LINC01551Q86U37 167 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 NIPSNAP3BQ9BS92 247 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 NDFIP1Q9BT67 221 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 SDF2L1Q9HCN8 221 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 NAT8Q9UHE5 227 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 CARHSP1Q9Y2V2 147 aaKnown RBP15.79■□□□□ 0.12
TPM1-204ENST00000334895 PRB2P02812 416 aaPredicted RBP15.79■□□□□ 0.12
TPM1-204ENST00000334895 LY96Q9Y6Y9 160 aa15.79■□□□□ 0.12
TPM1-204ENST00000334895 KLLNB2CW77 178 aa15.78■□□□□ 0.12
TPM1-204ENST00000334895 KRBOX1C9JBD0 128 aa15.78■□□□□ 0.12
TPM1-204ENST00000334895 J3KRW8 73 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms