RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 AKAP14Q86UN6 197 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 TCTE3Q8IZS6 198 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 RXFP4Q8TDU9 374 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.25
CIRBP-201ENST00000320936 LINC00477Q96M19 166 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 VGLL1Q99990 258 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 CELA1Q9UNI1 258 aa13.46□□□□□ -0.25
CIRBP-201ENST00000320936 CTXND1A0A1B0GTU2 59 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 PGPA6NDG6 321 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 C9orf47Q6ZRZ4 202 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 TMUB2Q71RG4 321 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 ZNF767PQ75MW2 155 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 SSX7Q7RTT5 188 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
CIRBP-201ENST00000320936 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-201ENST00000320936 TRAV12-3A0A0B4J271 114 aa13.44□□□□□ -0.26
CIRBP-201ENST00000320936 PRM2P04554 102 aa13.44□□□□□ -0.26
CIRBP-201ENST00000320936 CEMP1Q6PRD7 247 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-201ENST00000320936 Q8TAT8 98 aa13.44□□□□□ -0.26
CIRBP-201ENST00000320936 NIPSNAP3BQ9BS92 247 aa13.44□□□□□ -0.26
CIRBP-201ENST00000320936 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
CIRBP-201ENST00000320936 H7BYZ3 331 aa13.43□□□□□ -0.26
CIRBP-201ENST00000320936 SLC25A5P05141 298 aaKnown RBP13.43□□□□□ -0.26
CIRBP-201ENST00000320936 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
CIRBP-201ENST00000320936 ZNF138P52744 262 aa13.43□□□□□ -0.26
CIRBP-201ENST00000320936 EIF5AP63241 154 aaKnown RBP13.43□□□□□ -0.26
CIRBP-201ENST00000320936 C20orf144Q9BQM9 153 aa13.43□□□□□ -0.26
CIRBP-201ENST00000320936 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
CIRBP-201ENST00000320936 C7orf71A4D174 169 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 GPX1P07203 203 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
CIRBP-201ENST00000320936 FGF8P55075 233 aaPredicted RBP13.42□□□□□ -0.26
CIRBP-201ENST00000320936 TAS2R60P59551 318 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 ZNF726P1Q15940 193 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 Q6ZTC4 211 aa13.42□□□□□ -0.26
CIRBP-201ENST00000320936 TEX48A0A1B0GUV7 120 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 MAP1LC3B2A6NCE7 125 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 GNG5P63218 68 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 GOLT1AQ6ZVE7 132 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 MAP1LC3BQ9GZQ8 125 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 ZNF492Q9P255 531 aa13.41□□□□□ -0.26
CIRBP-201ENST00000320936 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
CIRBP-201ENST00000320936 C1QBP02746 253 aa13.4□□□□□ -0.26
CIRBP-201ENST00000320936 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.26
CIRBP-201ENST00000320936 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
CIRBP-201ENST00000320936 C16orf74Q96GX8 76 aa13.4□□□□□ -0.26
CIRBP-201ENST00000320936 DKK2Q9UBU2 259 aa13.4□□□□□ -0.26
CIRBP-201ENST00000320936 TRAV10A0A0B4J240 114 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 SEC11BP0C7V7 166 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 AZU1P20160 251 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 UBE2G2P60604 165 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 CD300CQ08708 224 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 C12orf74Q32Q52 190 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 TMED6Q8WW62 240 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 FAM19A4Q96LR4 140 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 TMPRSS5Q9H3S3 457 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 KLLNB2CW77 178 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 UMAD1C9J7I0 102 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 CRISP2P16562 243 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 FHITP49789 147 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
CIRBP-201ENST00000320936 KMT2CQ8NEZ4 4911 aaKnown RBP13.38□□□□□ -0.27
CIRBP-201ENST00000320936 GGTLC3B5MD39 225 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 K7EQM0 130 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 NMBP08949 121 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 DAD1P61803 113 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
CIRBP-201ENST00000320936 LGALSLQ3ZCW2 172 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-201ENST00000320936 PRR9Q5T870 116 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 ZFAND2AQ8N6M9 145 aa13.38□□□□□ -0.27
CIRBP-201ENST00000320936 TMEM263Q8WUH6 116 aaKnown RBP13.38□□□□□ -0.27
CIRBP-201ENST00000320936 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 IFNA7P01567 189 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 HTN3P15516 51 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 ZNF493Q6ZR52 646 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
CIRBP-201ENST00000320936 TRAV8-1A0A0A6YYK1 113 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 TRBV7-9A0A0J9YWB2 115 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 LCE6AA0A183 80 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 A0A1B0GV50 99 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 A0A1B0GVG6 124 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 CBY3A6NI87 242 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 IGLL5B9A064 214 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 RGS13O14921 159 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 TCRAP04437 139 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 ZFP69Q49AA0 526 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 ARL6IP6Q8N6S5 226 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 RNASE8Q8TDE3 154 aaKnown RBP13.36□□□□□ -0.27
CIRBP-201ENST00000320936 SFT2D1Q8WV19 159 aa13.36□□□□□ -0.27
CIRBP-201ENST00000320936 SERTM2A0A1B0GWG4 89 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms