RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 PEX7O00628 323 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 IGLV2-11P01706 119 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 DEFB121Q5J5C9 76 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 ZNF506Q5JVG8 444 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 MORN3Q6PF18 240 aaPredicted RBP9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 FAM210AQ96ND0 272 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 CSTL1Q9H114 145 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 PPP1R14DQ9NXH3 145 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.93
CHMP2A-201ENST00000312547 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 ZNF138P52744 262 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 APOC4P55056 127 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 RAB14P61106 215 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 RARRES2Q99969 163 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 SLC35B3Q9H1N7 401 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 ZNF492Q9P255 531 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 KLF12Q9Y4X4 402 aa9.26□□□□□ -0.93
CHMP2A-201ENST00000312547 RYR3Q15413 4870 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 TRBV7-9A0A0J9YWB2 115 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 F6UZH7 168 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 UBE2CO00762 179 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 TMEM78Q5T7P6 136 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 TMEM75Q8N9X5 138 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 Q8TAT8 98 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
CHMP2A-201ENST00000312547 AGRNO00468 2067 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 K7EQM0 130 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 CRXO43186 299 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 PDE6DO43924 150 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 CRISP2P16562 243 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 NUTF2P61970 127 aaKnown RBP9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 TOR2AQ5JU69 321 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 SBSPONQ8IVN8 264 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 ZFAND2AQ8N6M9 145 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 CSNK1G2-AS1Q8NCQ2 148 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 TVP23CQ96ET8 276 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
CHMP2A-201ENST00000312547 TRAV34A0A0B4J273 112 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 KLLNB2CW77 178 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 M0R2Z0 102 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 AMBPP02760 352 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 TSPOP30536 169 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 AKR1C3P42330 323 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 FXYD7P58549 80 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 TMEM183BQ1AE95 376 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 C1QTNF4Q9BXJ3 329 aa9.23□□□□□ -0.93
CHMP2A-201ENST00000312547 TMEM250H0YL14 139 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 S100A9P06702 114 aaKnown RBP9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 LEPP41159 167 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 CDKN1BP46527 198 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 Q6ZWC4 215 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 Q86TA4 180 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 FMC1Q96HJ9 113 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 ASCL2Q99929 193 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 TM2D3Q9BRN9 247 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 DNAH9Q9NYC9 4486 aa9.22□□□□□ -0.93
CHMP2A-201ENST00000312547 C9JQL5 133 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 SRP19P09132 144 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 SRSF3P84103 164 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 PRR9Q5T870 116 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 GFI1BQ5VTD9 330 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 PRNTQ86SH4 94 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 DERL1Q9BUN8 251 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 TP53TG1Q9Y2A0 90 aa9.21□□□□□ -0.94
CHMP2A-201ENST00000312547 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 LTAP01374 205 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 RBMY1A1P0DJD3 496 aaKnown RBP9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 RBMY1CP0DJD4 496 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 RPL35P42766 123 aaKnown RBP9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 TAS2R60P59551 318 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 UBE2G1P62253 170 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 RBMY1FQ15415 496 aaKnown RBP9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 SAPCD1Q5SSQ6 148 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms