RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 RCHY1Q96PM5 261 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 OR10J3Q5JRS4 329 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 C16orf54Q6UWD8 224 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 RBPMS2Q6ZRY4 209 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 OR4B1Q8NGF8 309 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 SELENOKQ9Y6D0 94 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 CUBNO60494 3623 aa17.18■□□□□ 0.34
PDLIM2-202ENST00000308354 CHEK1O14757 476 aa17.18■□□□□ 0.34
PDLIM2-202ENST00000308354 ZNF253O75346 499 aa17.18■□□□□ 0.34
PDLIM2-202ENST00000308354 CRIP1P50238 77 aa17.18■□□□□ 0.34
PDLIM2-202ENST00000308354 HBBP68871 147 aa17.18■□□□□ 0.34
PDLIM2-202ENST00000308354 C1orf194Q5T5A4 169 aa17.17■□□□□ 0.34
PDLIM2-202ENST00000308354 PEF1Q9UBV8 284 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-202ENST00000308354 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 SERTM2A0A1B0GWG4 89 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 PAFAH1B2P68402 229 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 FAM231BA6NCW3 169 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 CD33P20138 364 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 SAMD10Q9BYL1 202 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 YAE1D1Q9NRH1 226 aa17.16■□□□□ 0.34
PDLIM2-202ENST00000308354 A0A087X0K7 114 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 TM4SF20Q53R12 229 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 LCN12Q6JVE5 192 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 Q6ZWC4 215 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 EDN2P20800 178 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 IQCJQ1A5X6 159 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 Q8TAT8 98 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 C18orf32Q8TCD1 76 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 VGLL1Q99990 258 aa17.15■□□□□ 0.34
PDLIM2-202ENST00000308354 PRAC2D3DTV9 90 aa17.14■□□□□ 0.33
PDLIM2-202ENST00000308354 CT45A10P0DMU9 189 aa17.14■□□□□ 0.33
PDLIM2-202ENST00000308354 FAM209BQ5JX69 171 aa17.14■□□□□ 0.33
PDLIM2-202ENST00000308354 GLMPQ8WWB7 406 aa17.14■□□□□ 0.33
PDLIM2-202ENST00000308354 PRO1933Q9H354 126 aa17.14■□□□□ 0.33
PDLIM2-202ENST00000308354 C8orf86Q6ZUL3 223 aa17.13■□□□□ 0.33
PDLIM2-202ENST00000308354 A8MWP6 167 aa17.13■□□□□ 0.33
PDLIM2-202ENST00000308354 SCGB1D1O95968 90 aa17.13■□□□□ 0.33
PDLIM2-202ENST00000308354 ARL6IP6Q8N6S5 226 aa17.13■□□□□ 0.33
PDLIM2-202ENST00000308354 KCNS1Q96KK3 526 aa17.13■□□□□ 0.33
PDLIM2-202ENST00000308354 NF1P21359 2839 aa17.12■□□□□ 0.33
PDLIM2-202ENST00000308354 TRAV8-2A0A0B4J237 113 aa17.12■□□□□ 0.33
PDLIM2-202ENST00000308354 A0A1W2PS18 150 aa17.12■□□□□ 0.33
PDLIM2-202ENST00000308354 PRR25Q96S07 402 aa17.12■□□□□ 0.33
PDLIM2-202ENST00000308354 ALKBH7Q9BT30 221 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-202ENST00000308354 MTORP42345 2549 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 CD5LO43866 347 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 FOXA3P55318 350 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 ERCC8Q13216 396 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 IGKV3-7A0A075B6H7 116 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 FAM181BA6NEQ2 426 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 GPX1P07203 203 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 PKIAP61925 76 aa17.11■□□□□ 0.33
PDLIM2-202ENST00000308354 TMEM89A2RUT3 159 aa17.1■□□□□ 0.33
PDLIM2-202ENST00000308354 SLC50A1Q9BRV3 221 aa17.1■□□□□ 0.33
PDLIM2-202ENST00000308354 DNAJC9-AS1A6NH13 148 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 SH2D1AO60880 128 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 PMCHP20382 165 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 AMTP48728 403 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 RPL11P62913 178 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 FOXE3Q13461 319 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 SAPCD1Q5SSQ6 148 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 RHPN1-AS1Q9BWJ2 59 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 NAGKQ9UJ70 344 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 HAX1O00165 279 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 ARMS2P0C7Q2 107 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 FAM162BQ5T6X4 162 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 HIST2H2BDQ6DRA6 164 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 ZNF664Q8N3J9 261 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 TEX29Q8N6K0 151 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 SMR3AQ99954 134 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 TPPP3Q9BW30 176 aa17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 DAZ1Q9NQZ3 744 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-202ENST00000308354 TSTD3H0UI37 97 aa17.08■□□□□ 0.33
PDLIM2-202ENST00000308354 ELANEP08246 267 aa17.08■□□□□ 0.33
PDLIM2-202ENST00000308354 C16orf92Q96LL3 132 aa17.08■□□□□ 0.33
PDLIM2-202ENST00000308354 ESM1Q9NQ30 184 aa17.08■□□□□ 0.33
PDLIM2-202ENST00000308354 RNF114Q9Y508 228 aa17.08■□□□□ 0.33
PDLIM2-202ENST00000308354 TMSB15BA0A087X1C1 80 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 IGHV7-4-1A0A0J9YVY3 117 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 A0A1B0GUT8 65 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 KLF5Q13887 457 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 FAM106AQ4KMX7 169 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 COX8CQ7Z4L0 72 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 GPHB5Q86YW7 130 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 Q8N2B8 174 aa17.08■□□□□ 0.32
PDLIM2-202ENST00000308354 FBLL1A6NHQ2 334 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-202ENST00000308354 ZNF324O75467 553 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-202ENST00000308354 ZNF80P51504 273 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-202ENST00000308354 C18orf65Q6ZTR6 163 aa17.06■□□□□ 0.32
PDLIM2-202ENST00000308354 FAM19A2Q8N3H0 131 aa17.06■□□□□ 0.32
PDLIM2-202ENST00000308354 SRD5A1P18405 259 aa17.06■□□□□ 0.32
PDLIM2-202ENST00000308354 KLHDC1Q8N7A1 406 aa17.06■□□□□ 0.32
PDLIM2-202ENST00000308354 TMEM189A5PLL7 270 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 FOSL1P15407 271 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 LINC00469Q8N7U9 141 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 MYOZ3Q8TDC0 251 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 C20orf173Q96LM9 149 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 NRN1Q9NPD7 142 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 IGHV4OR15-8A0A075B7B6 117 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 A0A087WW49 117 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms