RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ABCA12Q86UK0 2595 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 LTAP01374 205 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 E7EQL1 145 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 GP9P14770 177 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 PET117Q6UWS5 81 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 F5H697 171 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 H3BVH4 76 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 NDUFS7O75251 213 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 EFNA4P52798 201 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 NAV2Q8IVL1 2488 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 FCN3O75636 299 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
PTPN9-201ENST00000306726 ZC2HC1BQ5TFG8 222 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
PTPN9-201ENST00000306726 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
PTPN9-201ENST00000306726 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
PTPN9-201ENST00000306726 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
PTPN9-201ENST00000306726 Q6ZQT7 251 aa11.48□□□□□ -0.57
PTPN9-201ENST00000306726 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
PTPN9-201ENST00000306726 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
PTPN9-201ENST00000306726 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
PTPN9-201ENST00000306726 IGLV2-23P01705 113 aa11.48□□□□□ -0.57
PTPN9-201ENST00000306726 FAM231DQ6ZW35 169 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 APOMO95445 188 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 DEFB125Q8N687 156 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 HBDP02042 147 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 EGR2P11161 476 aaPredicted RBP11.47□□□□□ -0.57
PTPN9-201ENST00000306726 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 CHODLQ9H9P2 273 aa11.47□□□□□ -0.57
PTPN9-201ENST00000306726 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 BBC3Q96PG8 261 aaPredicted RBP11.46□□□□□ -0.57
PTPN9-201ENST00000306726 TRGV9Q99603 122 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 DCHS2Q6V1P9 2916 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 PSMB11A5LHX3 300 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 FNDC10F2Z333 226 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 CRIP1P50238 77 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 LY6EQ16553 131 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 SH2D6Q7Z4S9 175 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
PTPN9-201ENST00000306726 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
PTPN9-201ENST00000306726 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.58
PTPN9-201ENST00000306726 MFAP4P55083 255 aa11.46□□□□□ -0.58
PTPN9-201ENST00000306726 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.58
PTPN9-201ENST00000306726 POU2AF1Q16633 256 aa11.46□□□□□ -0.58
PTPN9-201ENST00000306726 SCRT2Q9NQ03 307 aa11.46□□□□□ -0.58
PTPN9-201ENST00000306726 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 G3V318 75 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 SAMD5Q5TGI4 173 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 ITLN2Q8WWU7 325 aaPredicted RBP11.45□□□□□ -0.58
PTPN9-201ENST00000306726 CYSLTR1Q9Y271 337 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 MTORP42345 2549 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 A0A1B0GXF2 115 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 CD5LO43866 347 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 RPL7P18124 248 aaKnown RBP11.45□□□□□ -0.58
PTPN9-201ENST00000306726 ETDBQ3ZM63 59 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 CELSR1Q9NYQ6 3014 aa11.45□□□□□ -0.58
PTPN9-201ENST00000306726 SMIM13P0DJ93 91 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 COX8AP10176 69 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
PTPN9-201ENST00000306726 FXYD2P54710 66 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
PTPN9-201ENST00000306726 IL17RELQ6ZVW7 336 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 ZNF491Q8N8L2 437 aa11.44□□□□□ -0.58
PTPN9-201ENST00000306726 H3BMG7 143 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 TMEM155Q4W5P6 130 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 MYOZ3Q8TDC0 251 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 NBR2O15453 112 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 CDKN1BP46527 198 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 THBDP07204 575 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 TIMD4Q96H15 378 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
PTPN9-201ENST00000306726 WIPF2Q8TF74 440 aaPredicted RBP11.42□□□□□ -0.58
PTPN9-201ENST00000306726 MLST8Q9BVC4 326 aa11.42□□□□□ -0.58
PTPN9-201ENST00000306726 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
PTPN9-201ENST00000306726 RAI1Q7Z5J4 1906 aaPredicted RBP11.42□□□□□ -0.58
PTPN9-201ENST00000306726 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
PTPN9-201ENST00000306726 SMAD7O15105 426 aaKnown RBP11.42□□□□□ -0.58
PTPN9-201ENST00000306726 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
PTPN9-201ENST00000306726 ZNF672Q499Z4 452 aaPredicted RBP11.42□□□□□ -0.58
PTPN9-201ENST00000306726 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
PTPN9-201ENST00000306726 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 GATA4P43694 442 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 C15orf32Q32M92 178 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 C16orf92Q96LL3 132 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms