RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 SNRPCP09234 159 aaKnown RBP12.94□□□□□ -0.34
TMEM88-201ENST00000301599 ATP6V1FQ16864 119 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 VWC2Q2TAL6 325 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 MIC13Q5XKP0 118 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 PFDN5Q99471 154 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 ATP5SQ99766 215 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 PARD6GQ9BYG4 376 aaPredicted RBP12.94□□□□□ -0.34
TMEM88-201ENST00000301599 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 NKX6-2Q9C056 277 aaPredicted RBP12.94□□□□□ -0.34
TMEM88-201ENST00000301599 PXMP4Q9Y6I8 212 aa12.94□□□□□ -0.34
TMEM88-201ENST00000301599 AZU1P20160 251 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 CDKN1BP46527 198 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
TMEM88-201ENST00000301599 TAS2R60P59551 318 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 GUK1Q16774 197 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 MORN5Q5VZ52 161 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
TMEM88-201ENST00000301599 IGLC2P0DOY2 106 aa12.92□□□□□ -0.34
TMEM88-201ENST00000301599 LINC00336Q6ZUF6 198 aa12.92□□□□□ -0.34
TMEM88-201ENST00000301599 UBE2DNLQ8IWF7 75 aa12.92□□□□□ -0.34
TMEM88-201ENST00000301599 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
TMEM88-201ENST00000301599 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
TMEM88-201ENST00000301599 TRAV5A0A0B4J249 113 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 IGSF23A1L1A6 192 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 H3BQ15 152 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 H3BTX0 84 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
TMEM88-201ENST00000301599 HTN1P15515 57 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 NHLH2Q02577 135 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 RNF212Q495C1 297 aa12.91□□□□□ -0.34
TMEM88-201ENST00000301599 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
TMEM88-201ENST00000301599 SLC17A3O00476 420 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 AKR1C8PQ5T2L2 129 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 C20orf144Q9BQM9 153 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 DNAH6Q9C0G6 4158 aa12.9□□□□□ -0.34
TMEM88-201ENST00000301599 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 H7BYZ3 331 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 M0R2N4 97 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 MPDU1O75352 247 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 SERF2P84101 59 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 LGALS9BQ3B8N2 356 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
TMEM88-201ENST00000301599 WFDC1Q9HC57 220 aa12.89□□□□□ -0.35
TMEM88-201ENST00000301599 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
TMEM88-201ENST00000301599 PLAC8L1A1L4L8 177 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 CBY3A6NI87 242 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 FGF7P21781 194 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 ATP6V0CP27449 155 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 HSD17B11Q8NBQ5 300 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
TMEM88-201ENST00000301599 ZNF253O75346 499 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 SCO1O75880 301 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 ATP5G1P05496 136 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 ATP5G3P48201 142 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 CLINT1Q14677 625 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 TMEM14CQ9P0S9 112 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 TIMM9Q9Y5J7 89 aa12.87□□□□□ -0.35
TMEM88-201ENST00000301599 F5H768 121 aa12.86□□□□□ -0.35
TMEM88-201ENST00000301599 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
TMEM88-201ENST00000301599 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 MBP02144 154 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 H2AFB1P0C5Y9 115 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 SFTA3P0C7M3 94 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 LEPP41159 167 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 FAM213BQ8TBF2 198 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 NPCDR1Q9BY65 106 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
TMEM88-201ENST00000301599 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
TMEM88-201ENST00000301599 IGLV2-18A0A075B6J9 118 aa12.84□□□□□ -0.35
TMEM88-201ENST00000301599 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
TMEM88-201ENST00000301599 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
TMEM88-201ENST00000301599 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
TMEM88-201ENST00000301599 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
TMEM88-201ENST00000301599 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
TMEM88-201ENST00000301599 PDE6HQ13956 83 aa12.83□□□□□ -0.36
TMEM88-201ENST00000301599 Q6ZR54 194 aa12.83□□□□□ -0.36
TMEM88-201ENST00000301599 ATG101Q9BSB4 218 aa12.83□□□□□ -0.36
TMEM88-201ENST00000301599 TRAV12-3A0A0B4J271 114 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 PRSS29PA6NIE9 313 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 J3KRW8 73 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms