RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SIGMAR1Q99720 223 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 CKS1BP61024 79 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 V9GYV3 84 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 DLEU1O43261 78 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 GATA4P43694 442 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 SYNJ2BPP57105 145 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 HERVK_113P61574 105 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 NPFFR1Q9GZQ6 430 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 C11orf1Q9H5F2 150 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 LAMA5O15230 3695 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 NPSP0C0P6 89 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 ZC2HC1AQ96GY0 325 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 PRO3102Q9H379 93 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 ZFHX4Q86UP3 3567 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 TMEM262E9PQX1 116 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 H3BUT2 72 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 UBE2L6O14933 153 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 BRWD1-AS2P59051 145 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 OR10J3Q5JRS4 329 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 Q86TA4 180 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 Q8NA96 180 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 SYT8Q8NBV8 401 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 KLK9Q9UKQ9 250 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 DCHS1Q96JQ0 3298 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 USP9YO00507 2555 aaPredicted RBP3.8□□□□□ -1.8
UBR1-201ENST00000290650 SNCGO76070 127 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 RPS20P60866 119 aaKnown RBP3.8□□□□□ -1.8
UBR1-201ENST00000290650 DEFB136Q30KP8 78 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 Q8NFD4 153 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 RPL35AP18077 110 aaKnown RBP3.8□□□□□ -1.8
UBR1-201ENST00000290650 TSPOP30536 169 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 YPEL4Q96NS1 127 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 MOB4Q9Y3A3 225 aa3.8□□□□□ -1.8
UBR1-201ENST00000290650 PF4P02776 101 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 CFHR3Q02985 330 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 CD300EQ496F6 205 aaPredicted RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 AMMECR1LQ6DCA0 310 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 ZNF295-AS1Q8N0V1 137 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 PROP1O75360 226 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 USP9XQ93008 2570 aaPredicted RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 IGHV3-16A0A0C4DH30 117 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 K7EMI3 77 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 PRTN3P24158 256 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 TOMM7Q9P0U1 55 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 PEF1Q9UBV8 284 aaKnown RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 TOMM40O96008 361 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 C10orf126Q8N4M7 172 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 MPV17L2Q567V2 206 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 C1orf122Q6ZSJ8 110 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 C18orf32Q8TCD1 76 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 PHLDA1Q8WV24 401 aaPredicted RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 TRAV9-2A0A087WT02 112 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 A0A0G2JLM5 398 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 IGHV4-38-2P0DP08 117 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 ADORA2A-AS1P86434 159 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 GUSBP1Q15486 140 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 SPINK13Q1W4C9 94 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 VWC2Q2TAL6 325 aa3.79□□□□□ -1.8
UBR1-201ENST00000290650 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
UBR1-201ENST00000290650 GATA1P15976 413 aaPredicted RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 HOXB4P17483 251 aaPredicted RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 IFI27L1Q96BM0 104 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 RAX2Q96IS3 184 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 SHANK2-AS3Q9BTD1 123 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 ZFP36P26651 326 aaKnown RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 LINC00173Q6ZV60 143 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 PIP4P2Q8N4L2 257 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 TMEM158Q8WZ71 300 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 RHPN1-AS1Q9BWJ2 59 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 MRPL16Q9NX20 251 aaKnown RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 HBDP02042 147 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 SUMO2P61956 95 aaKnown RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 IGFL2Q6UWQ7 119 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 TNFRSF18Q9Y5U5 241 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 PCSK5Q92824 1860 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 IGLC1P0CG04 106 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 Q6ZSR3 168 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 KLHL30-AS1Q8NEE0 82 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 M0R1W7 72 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 BLCAPP62952 87 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 FOXE3Q13461 319 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 RNASE13Q5GAN3 156 aaKnown RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 PATE2Q6UY27 113 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 SP5Q6BEB4 398 aaPredicted RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 ZNF562Q6V9R5 426 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 GEMIN7Q9H840 131 aaKnown RBP3.78□□□□□ -1.8
UBR1-201ENST00000290650 ABCA12Q86UK0 2595 aa3.78□□□□□ -1.8
UBR1-201ENST00000290650 TRBV19A0A075B6N1 114 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 OR11H12B2RN74 326 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PRR20EP86478 221 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PRR20CP86479 221 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms