RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 SHANK2-AS3Q9BTD1 123 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 CACNA1EQ15878 2313 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 KLF2Q9Y5W3 355 aaPredicted RBP8.54□□□□□ -1.04
OTOF-201ENST00000272371 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
OTOF-201ENST00000272371 J3QQQ9 107 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 PSPNO60542 156 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 CFC1BP0CG36 223 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 CFC1P0CG37 223 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 HEATR1Q9H583 2144 aaKnown RBP8.53□□□□□ -1.04
OTOF-201ENST00000272371 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 IGHV1-18A0A0C4DH31 117 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 MLANAQ16655 118 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 Q6ZS49 121 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 FRMPD3Q5JV73 1810 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 LINC00527Q9UJ94 153 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 LINC00205P59089 165 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 CD177Q8N6Q3 437 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 C9orf106Q8NAJ2 232 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 ABCA1O95477 2261 aa8.53□□□□□ -1.04
OTOF-201ENST00000272371 CMC4P56277 68 aaPredicted RBP8.52□□□□□ -1.04
OTOF-201ENST00000272371 RNF144BQ7Z419 303 aa8.52□□□□□ -1.04
OTOF-201ENST00000272371 WFDC9Q8NEX5 89 aa8.52□□□□□ -1.04
OTOF-201ENST00000272371 GVINP1Q7Z2Y8 2422 aa8.52□□□□□ -1.04
OTOF-201ENST00000272371 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 IGLL5B9A064 214 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 F6UB75 175 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 K7ENP7 123 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 IGLC1P0CG04 106 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 Q6P435 159 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 DSCR9P59020 149 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 KLF5Q13887 457 aaPredicted RBP8.52□□□□□ -1.05
OTOF-201ENST00000272371 NSUN5P1Q3KNT7 163 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 RNF5Q99942 180 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 NLRC5Q86WI3 1866 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 IGLV3-32A0A0A0MS00 114 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 IGHV1-46P01743 117 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 ORMDL1Q9P0S3 153 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 ZNF581Q9P0T4 197 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 EP400Q96L91 3159 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 FER1L5A0AVI2 2057 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
OTOF-201ENST00000272371 M0R1W7 72 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 DKK1O94907 266 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 EFNA4P52798 201 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 ZCCHC24Q8N2G6 241 aaKnown RBP8.51□□□□□ -1.05
OTOF-201ENST00000272371 RNASE6Q93091 150 aaKnown RBP8.51□□□□□ -1.05
OTOF-201ENST00000272371 VMO1Q7Z5L0 202 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 SIGLEC9Q9Y336 463 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 SRRM5B3KS81 715 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 NTN3O00634 580 aaPredicted RBP8.51□□□□□ -1.05
OTOF-201ENST00000272371 PSMB8P28062 276 aa8.51□□□□□ -1.05
OTOF-201ENST00000272371 UBE2DNLQ8IWF7 75 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 HEATR5AQ86XA9 2040 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 SPTBN1Q01082 2364 aaKnown RBP8.5□□□□□ -1.05
OTOF-201ENST00000272371 CLPSL1A2RUU4 121 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 NKAPP1Q8N9T2 125 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 PRB2P02812 416 aaPredicted RBP8.5□□□□□ -1.05
OTOF-201ENST00000272371 PAX9P55771 341 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 FAM223AQ8IWN6 122 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 TRBV25-1A0A075B6N4 114 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 VWCEQ96DN2 955 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 WFDC2Q14508 124 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 SDK2Q58EX2 2172 aa8.5□□□□□ -1.05
OTOF-201ENST00000272371 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 NDUFS5O43920 106 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 RPL35AP18077 110 aaKnown RBP8.49□□□□□ -1.05
OTOF-201ENST00000272371 PLXNA4Q9HCM2 1894 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 FOXI1Q12951 378 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 TEN1Q86WV5 123 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 E9PQ18 207 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 RHODO00212 210 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 C20orf204Q6ZNR8 217 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 TMEM219Q86XT9 240 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 ZNF747Q9BV97 191 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 LYNX1G3V0Z9 82 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 LYNX1P0DP58 116 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 CFPP27918 469 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 HERV-K104P63124 156 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 C5orf64Q2M2E5 130 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
OTOF-201ENST00000272371 Q96MF0 132 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 BUB1B-PAK6H3BSN5 160 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 ASPHD1Q5U4P2 390 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 ZNF493Q6ZR52 646 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 UBE2E2Q96LR5 201 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 EFNA2O43921 213 aa8.49□□□□□ -1.05
OTOF-201ENST00000272371 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
OTOF-201ENST00000272371 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
OTOF-201ENST00000272371 K7EN84 100 aa8.48□□□□□ -1.05
OTOF-201ENST00000272371 NXPH4O95158 308 aa8.48□□□□□ -1.05
OTOF-201ENST00000272371 CR1LQ2VPA4 569 aa8.48□□□□□ -1.05
OTOF-201ENST00000272371 THAP8Q8NA92 274 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms