RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 C2CD4CQ8TF44 421 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 WFDC10AQ9H1F0 79 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 PARLQ9H300 379 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 S100A9P06702 114 aaKnown RBP11.57□□□□□ -0.56
GYPC-201ENST00000259254 FLI1Q01543 452 aaPredicted RBP11.57□□□□□ -0.56
GYPC-201ENST00000259254 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 Q8TAT8 98 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 SMIM7Q9BQ49 75 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 FAM110AQ9BQ89 295 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
GYPC-201ENST00000259254 FBLL1A6NHQ2 334 aaKnown RBP11.56□□□□□ -0.56
GYPC-201ENST00000259254 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 HLA-DRB4P13762 266 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 ZNF138P52744 262 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 KRTAP10-11P60412 298 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 TMEM183BQ1AE95 376 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 C9orf47Q6ZRZ4 202 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 Q86TA4 180 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 STHQ8IWL8 128 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 LINC00477Q96M19 166 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 ASCL2Q99929 193 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 HLA-DRB4X5D2U9 266 aa11.56□□□□□ -0.56
GYPC-201ENST00000259254 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 GNG4P50150 75 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 TAS2R60P59551 318 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 KLF12Q9Y4X4 402 aa11.55□□□□□ -0.56
GYPC-201ENST00000259254 F8W036 122 aa11.54□□□□□ -0.56
GYPC-201ENST00000259254 H3BMM0 161 aa11.54□□□□□ -0.56
GYPC-201ENST00000259254 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
GYPC-201ENST00000259254 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
GYPC-201ENST00000259254 BAGE2Q86Y30 109 aa11.54□□□□□ -0.56
GYPC-201ENST00000259254 TRBV6-1A0A0K0K1D8 114 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 CT45A10P0DMU9 189 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 NHLRC2Q8NBF2 726 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
GYPC-201ENST00000259254 J3KRW8 73 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 RPL35AP18077 110 aaKnown RBP11.52□□□□□ -0.57
GYPC-201ENST00000259254 LEPP41159 167 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 Q8N1Y9 231 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 IGF2BP2-AS1Q96M15 143 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 NIPSNAP3BQ9BS92 247 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 TUBA4BQ9H853 241 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.57
GYPC-201ENST00000259254 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 C9JCJ5 164 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 LTAP01374 205 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
GYPC-201ENST00000259254 TSPOP30536 169 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 FXYD7P58549 80 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
GYPC-201ENST00000259254 NAT8Q9UHE5 227 aa11.51□□□□□ -0.57
GYPC-201ENST00000259254 TGP01266 2768 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
GYPC-201ENST00000259254 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
GYPC-201ENST00000259254 PRB2P02812 416 aaPredicted RBP11.5□□□□□ -0.57
GYPC-201ENST00000259254 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
GYPC-201ENST00000259254 ADCYAP1P18509 176 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 SPINK13Q1W4C9 94 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 C8orf49Q96NF6 230 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
GYPC-201ENST00000259254 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
GYPC-201ENST00000259254 DNAH3Q8TD57 4116 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 KRBOX1C9JBD0 128 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 M0R2Z0 102 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 GPX1P07203 203 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
GYPC-201ENST00000259254 ADIRFQ15847 76 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 PRR27Q6MZM9 219 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 AMTNQ6UX39 209 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 SEC11CQ9BY50 192 aa11.49□□□□□ -0.57
GYPC-201ENST00000259254 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
GYPC-201ENST00000259254 A8MTW9 85 aa11.48□□□□□ -0.57
GYPC-201ENST00000259254 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
GYPC-201ENST00000259254 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
GYPC-201ENST00000259254 FAM19A4Q96LR4 140 aa11.48□□□□□ -0.57
GYPC-201ENST00000259254 CLUHP3Q96NS8 147 aa11.48□□□□□ -0.57
GYPC-201ENST00000259254 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
GYPC-201ENST00000259254 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
GYPC-201ENST00000259254 GCGP01275 180 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms