RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 ZNF705GA8MUZ8 300 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-201ENST00000238688 H3BTX0 84 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 OVOL1O14753 267 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 P01737 135 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 MT-ND6P03923 174 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-201ENST00000238688 WDR73Q6P4I2 378 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 ATP5L2Q7Z4Y8 100 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 GBGT1Q8N5D6 347 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 TSKUQ8WUA8 353 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 LINC00479Q96M42 142 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 DNAH3Q8TD57 4116 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 IGHV3OR16-8A0A075B7F1 116 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 A0A1W2PPQ1 181 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 TMEM213A2RRL7 107 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 M0R3E3 92 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 SOCS3O14543 225 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
SLIRP-201ENST00000238688 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
SLIRP-201ENST00000238688 PRNTQ86SH4 94 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 C11orf44Q8N8P7 122 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 DPF1Q92782 380 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 RPP21Q9H633 154 aaKnown RBP10□□□□□ -0.81
SLIRP-201ENST00000238688 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
SLIRP-201ENST00000238688 NAT8BQ9UHF3 227 aa10□□□□□ -0.81
SLIRP-201ENST00000238688 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 ZNF207O43670 478 aaKnown RBP9.99□□□□□ -0.81
SLIRP-201ENST00000238688 CXCL1P09341 107 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 RPS20P60866 119 aaKnown RBP9.99□□□□□ -0.81
SLIRP-201ENST00000238688 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 OR5I1Q13606 314 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 FAM162BQ5T6X4 162 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 LCNL1Q6ZST4 164 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 NUDT10Q8NFP7 164 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 NUDT11Q96G61 164 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 PRR25Q96S07 402 aa9.99□□□□□ -0.81
SLIRP-201ENST00000238688 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-201ENST00000238688 IGHV4OR15-8A0A075B7B6 117 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 A0A087WW49 117 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 TRAV8-2A0A0B4J237 113 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 A0A1B0GW15 77 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
SLIRP-201ENST00000238688 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-201ENST00000238688 SMUG1Q53HV7 270 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 TM4SF20Q53R12 229 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 C10orf99Q6UWK7 81 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 ASCL2Q99929 193 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
SLIRP-201ENST00000238688 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
SLIRP-201ENST00000238688 IZUMO1RA6ND01 250 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 S100A8P05109 93 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 CD28P10747 220 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 CBLN1P23435 193 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 ZNF138P52744 262 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
SLIRP-201ENST00000238688 FHL3Q13643 280 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 TCF24Q7RTU0 167 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 OR1N2Q8NGR9 330 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
SLIRP-201ENST00000238688 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 S100A6P06703 90 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.82
SLIRP-201ENST00000238688 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 TRAV25A0A0B4J276 109 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 IGHV3-66A0A0C4DH42 116 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 G3V4G9 280 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 HLA-DQA1P01909 254 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 RPL11P62913 178 aaKnown RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 BEAN1Q3B7T3 259 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 RBPMS2Q6ZRY4 209 aaKnown RBP9.95□□□□□ -0.82
SLIRP-201ENST00000238688 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 ZNF738Q8NE65 137 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 DCANP1Q8TF63 244 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
SLIRP-201ENST00000238688 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
SLIRP-201ENST00000238688 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
SLIRP-201ENST00000238688 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
SLIRP-201ENST00000238688 KHDC1LQ5JSQ8 128 aa9.94□□□□□ -0.82
SLIRP-201ENST00000238688 CITED2Q99967 270 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms