RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PRR25Q96S07 402 aa10.37□□□□□ -0.75
SEC61B-201ENST00000223641 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
SEC61B-201ENST00000223641 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
SEC61B-201ENST00000223641 RPH3ALQ9UNE2 315 aa10.37□□□□□ -0.75
SEC61B-201ENST00000223641 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 TAS2R60P59551 318 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 ERCC8Q13216 396 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 NDUFA5Q16718 116 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 ACTL10Q5JWF8 245 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 TRPT1Q86TN4 253 aaKnown RBP10.36□□□□□ -0.75
SEC61B-201ENST00000223641 DEFB125Q8N687 156 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 FMC1Q96HJ9 113 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 FAM19A4Q96LR4 140 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 DERL1Q9BUN8 251 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 ZNF492Q9P255 531 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 LENEPQ9Y5L5 61 aa10.36□□□□□ -0.75
SEC61B-201ENST00000223641 TRAV34A0A0B4J273 112 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 CT45A10P0DMU9 189 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 AKR1C3P42330 323 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 RPL35P42766 123 aaKnown RBP10.35□□□□□ -0.75
SEC61B-201ENST00000223641 ZNF138P52744 262 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 FLI1Q01543 452 aaPredicted RBP10.35□□□□□ -0.75
SEC61B-201ENST00000223641 HIST1H1AQ02539 215 aaPredicted RBP10.35□□□□□ -0.75
SEC61B-201ENST00000223641 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 PARLQ9H300 379 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 TREM1Q9NP99 234 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 PSG8Q9UQ74 426 aa10.35□□□□□ -0.75
SEC61B-201ENST00000223641 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 A8MZ25 164 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 TVP23CQ96ET8 276 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 MLST8Q9BVC4 326 aa10.34□□□□□ -0.75
SEC61B-201ENST00000223641 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
SEC61B-201ENST00000223641 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
SEC61B-201ENST00000223641 C9JCJ5 164 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 LTAP01374 205 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
SEC61B-201ENST00000223641 CRISP2P16562 243 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 UBE2G1P62253 170 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 Q86TA4 180 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 STHQ8IWL8 128 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 ZFP30Q9Y2G7 519 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 NOTCH1P46531 2555 aa10.33□□□□□ -0.76
SEC61B-201ENST00000223641 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 LINC00322Q6ZN03 302 aaPredicted RBP10.32□□□□□ -0.76
SEC61B-201ENST00000223641 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 Q8TAT8 98 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 SRD5A3Q9H8P0 318 aa10.32□□□□□ -0.76
SEC61B-201ENST00000223641 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 SAPCD1Q5SSQ6 148 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 TMEM183AQ8IXX5 376 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 ZFAND2AQ8N6M9 145 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 SMIM7Q9BQ49 75 aa10.31□□□□□ -0.76
SEC61B-201ENST00000223641 AURKAIP1Q9NWT8 199 aaPredicted RBP10.31□□□□□ -0.76
SEC61B-201ENST00000223641 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 KLLNB2CW77 178 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 CEBPGP53567 150 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 CENPWQ5EE01 88 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 BAGE2Q86Y30 109 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 ASCL2Q99929 193 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
SEC61B-201ENST00000223641 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
SEC61B-201ENST00000223641 CRXO43186 299 aaPredicted RBP10.29□□□□□ -0.76
SEC61B-201ENST00000223641 GIG44P09565 113 aaPredicted RBP10.29□□□□□ -0.76
SEC61B-201ENST00000223641 ADCYAP1P18509 176 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 CDKN1BP46527 198 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 GNG4P50150 75 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 ZNF674Q2M3X9 581 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 MORN3Q6PF18 240 aaPredicted RBP10.29□□□□□ -0.76
SEC61B-201ENST00000223641 NDFIP1Q9BT67 221 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
SEC61B-201ENST00000223641 KIR2DL5BA0A0G2JN68 375 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 KIR2DL5BA0A0G2JPC4 375 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 K7EIL1 84 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 AMBPP02760 352 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 TSPOP30536 169 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 LEPP41159 167 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 NUTF2P61970 127 aaKnown RBP10.28□□□□□ -0.76
SEC61B-201ENST00000223641 KIR3DS1Q14943 382 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 PRR9Q5T870 116 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 KIR2DL5AQ8N109 375 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 KIR2DL5BQ8NHK3 375 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 OCC1Q8TAD7 63 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms