RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HTN1P15515 57 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 TSPOP30536 169 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 LEPP41159 167 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 Q6ZTC4 211 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 HYLS1Q96M11 299 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
LSM5-201ENST00000223084 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 LCE6AA0A183 80 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 PGPA6NDG6 321 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 HMSDA8MTL9 139 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 GCHFRP30047 84 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 ZNF345Q14585 488 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 ZNF726P1Q15940 193 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 FAM222AQ5U5X8 452 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 ARPC5LQ9BPX5 153 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 OTORQ9NRC9 128 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
LSM5-201ENST00000223084 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
LSM5-201ENST00000223084 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
LSM5-201ENST00000223084 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 C1QBP02746 253 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 CSN1S1P47710 185 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 TAS2R60P59551 318 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 CD300CQ08708 224 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 TMEM78Q5T7P6 136 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 TMEM256Q8N2U0 113 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 Q8TAT8 98 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 FAM19A4Q96LR4 140 aa9.06□□□□□ -0.96
LSM5-201ENST00000223084 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
LSM5-201ENST00000223084 A0A0D9SG52 128 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 PLAC8L1A1L4L8 177 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 CXorf1O96002 111 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
LSM5-201ENST00000223084 GNG5P63218 68 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 BTN1A1Q13410 526 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 IQCF2Q8IXL9 164 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 ZNF492Q9P255 531 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 DNAH1Q9P2D7 4330 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
LSM5-201ENST00000223084 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 KANTRA0A1W2PQU2 76 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 C7orf71A4D174 169 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 KLLNB2CW77 178 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 H7BYZ3 331 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 BCL2L11O43521 198 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 SLC25A5P05141 298 aaKnown RBP9.04□□□□□ -0.96
LSM5-201ENST00000223084 CRISP2P16562 243 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 ZNF138P52744 262 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 FGF8P55075 233 aaPredicted RBP9.04□□□□□ -0.96
LSM5-201ENST00000223084 PRR9Q5T870 116 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 Q6ZQT7 251 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 GOLT1AQ6ZVE7 132 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 TMUB2Q71RG4 321 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 CMTM2Q8TAZ6 248 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 SUN5Q8TC36 379 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 RXFP4Q8TDU9 374 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 C2CD4CQ8TF44 421 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 C20orf144Q9BQM9 153 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 NIPSNAP3BQ9BS92 247 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 ZNF471Q9BX82 626 aaPredicted RBP9.04□□□□□ -0.96
LSM5-201ENST00000223084 TMPRSS5Q9H3S3 457 aa9.04□□□□□ -0.96
LSM5-201ENST00000223084 LYSTQ99698 3801 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 RYR2Q92736 4967 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 IGLL5B9A064 214 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 C11orf94C9JXX5 98 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 PFDN1O60925 122 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 GPX1P07203 203 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 FHITP49789 147 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 FAM74A1Q5RGS3 127 aa9.03□□□□□ -0.96
LSM5-201ENST00000223084 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.97
LSM5-201ENST00000223084 HTN3P15516 51 aa9.02□□□□□ -0.97
LSM5-201ENST00000223084 ZFP69Q49AA0 526 aa9.02□□□□□ -0.97
LSM5-201ENST00000223084 RNASE8Q8TDE3 154 aaKnown RBP9.02□□□□□ -0.97
LSM5-201ENST00000223084 C16orf74Q96GX8 76 aa9.02□□□□□ -0.97
LSM5-201ENST00000223084 SGK494Q96LW2 274 aa9.02□□□□□ -0.97
LSM5-201ENST00000223084 TMEM167BQ9NRX6 74 aa9.02□□□□□ -0.97
LSM5-201ENST00000223084 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 GGTLC3B5MD39 225 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 UBE2G2P60604 165 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 DAD1P61803 113 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
LSM5-201ENST00000223084 LGALSLQ3ZCW2 172 aaPredicted RBP9.01□□□□□ -0.97
LSM5-201ENST00000223084 CCDC28AQ8IWP9 274 aa9.01□□□□□ -0.97
LSM5-201ENST00000223084 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
LSM5-201ENST00000223084 NOP10Q9NPE3 64 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms