RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 A0A1B0GUT8 65 aa22.69■■□□□ 1.22
PABPN1-201ENST00000216727 SMAD7O15105 426 aaKnown RBP22.69■■□□□ 1.22
PABPN1-201ENST00000216727 PLA2G2AP14555 144 aa22.69■■□□□ 1.22
PABPN1-201ENST00000216727 KLF5Q13887 457 aaPredicted RBP22.69■■□□□ 1.22
PABPN1-201ENST00000216727 C18orf32Q8TCD1 76 aa22.69■■□□□ 1.22
PABPN1-201ENST00000216727 ALKBH7Q9BT30 221 aaPredicted RBP22.69■■□□□ 1.22
PABPN1-201ENST00000216727 PEF1Q9UBV8 284 aaKnown RBP22.69■■□□□ 1.22
PABPN1-201ENST00000216727 TMEM189A5PLL7 270 aa22.68■■□□□ 1.22
PABPN1-201ENST00000216727 A0A1B0GW15 77 aa22.67■■□□□ 1.22
PABPN1-201ENST00000216727 ERCC8Q13216 396 aa22.67■■□□□ 1.22
PABPN1-201ENST00000216727 RIGQ13278 110 aa22.67■■□□□ 1.22
PABPN1-201ENST00000216727 TENM4Q6N022 2769 aa22.66■■□□□ 1.22
PABPN1-201ENST00000216727 J3QKU1 62 aa22.66■■□□□ 1.22
PABPN1-201ENST00000216727 SRSF2Q01130 221 aaKnown RBP22.66■■□□□ 1.22
PABPN1-201ENST00000216727 RCHY1Q96PM5 261 aa22.66■■□□□ 1.22
PABPN1-201ENST00000216727 ZNF80P51504 273 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-201ENST00000216727 GATD1Q8NB37 220 aa22.65■■□□□ 1.22
PABPN1-201ENST00000216727 KCNS1Q96KK3 526 aa22.65■■□□□ 1.22
PABPN1-201ENST00000216727 C16orf92Q96LL3 132 aa22.65■■□□□ 1.22
PABPN1-201ENST00000216727 PSMG3-AS1Q96PY0 264 aa22.65■■□□□ 1.22
PABPN1-201ENST00000216727 DAZ1Q9NQZ3 744 aaKnown RBP22.65■■□□□ 1.22
PABPN1-201ENST00000216727 HOXA3O43365 443 aaPredicted RBP22.64■■□□□ 1.22
PABPN1-201ENST00000216727 ARMS2P0C7Q2 107 aa22.64■■□□□ 1.22
PABPN1-201ENST00000216727 RPS20P60866 119 aaKnown RBP22.64■■□□□ 1.22
PABPN1-201ENST00000216727 SAMD10Q9BYL1 202 aa22.64■■□□□ 1.22
PABPN1-201ENST00000216727 AGPAT4-IT1Q9H0P7 198 aa22.64■■□□□ 1.22
PABPN1-201ENST00000216727 DOPEY2Q9Y3R5 2298 aa22.64■■□□□ 1.21
PABPN1-201ENST00000216727 IGHV7-4-1A0A0J9YVY3 117 aa22.64■■□□□ 1.21
PABPN1-201ENST00000216727 GPHB5Q86YW7 130 aa22.64■■□□□ 1.21
PABPN1-201ENST00000216727 PPP1R14DQ9NXH3 145 aa22.64■■□□□ 1.21
PABPN1-201ENST00000216727 K7EMT4 169 aa22.63■■□□□ 1.21
PABPN1-201ENST00000216727 GPX1P07203 203 aa22.63■■□□□ 1.21
PABPN1-201ENST00000216727 C9orf47Q6ZRZ4 202 aa22.63■■□□□ 1.21
PABPN1-201ENST00000216727 ZNF702PQ9H963 129 aa22.63■■□□□ 1.21
PABPN1-201ENST00000216727 FABP5P3A8MUU1 101 aa22.62■■□□□ 1.21
PABPN1-201ENST00000216727 FAM106AQ4KMX7 169 aa22.62■■□□□ 1.21
PABPN1-201ENST00000216727 TMEM78Q5T7P6 136 aa22.62■■□□□ 1.21
PABPN1-201ENST00000216727 BORCS7Q96B45 105 aa22.62■■□□□ 1.21
PABPN1-201ENST00000216727 SOCS3O14543 225 aa22.61■■□□□ 1.21
PABPN1-201ENST00000216727 ZNF138P52744 262 aa22.61■■□□□ 1.21
PABPN1-201ENST00000216727 IQCJQ1A5X6 159 aa22.61■■□□□ 1.21
PABPN1-201ENST00000216727 C10orf99Q6UWK7 81 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 SIGLECL1Q8N7X8 197 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 RHPN1-AS1Q9BWJ2 59 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 TEX15Q9BXT5 2789 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 LOC102724200A0A096LPH7 203 aaPredicted RBP22.6■■□□□ 1.21
PABPN1-201ENST00000216727 FOXE3Q13461 319 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 IL17RELQ6ZVW7 336 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 Q6ZWC4 215 aa22.6■■□□□ 1.21
PABPN1-201ENST00000216727 MXRA5Q9NR99 2828 aa22.59■■□□□ 1.21
PABPN1-201ENST00000216727 ELANEP08246 267 aa22.59■■□□□ 1.21
PABPN1-201ENST00000216727 TM4SF20Q53R12 229 aa22.59■■□□□ 1.21
PABPN1-201ENST00000216727 NRN1Q9NPD7 142 aa22.59■■□□□ 1.21
PABPN1-201ENST00000216727 TMSB15BA0A087X1C1 80 aa22.58■■□□□ 1.21
PABPN1-201ENST00000216727 SMPXQ9UHP9 88 aa22.58■■□□□ 1.21
PABPN1-201ENST00000216727 NBPF19A0A087WUL8 3843 aa22.58■■□□□ 1.2
PABPN1-201ENST00000216727 ZNF324O75467 553 aaPredicted RBP22.58■■□□□ 1.2
PABPN1-201ENST00000216727 LYZL1Q6UWQ5 148 aa22.58■■□□□ 1.2
PABPN1-201ENST00000216727 WFDC11Q8NEX6 87 aa22.58■■□□□ 1.2
PABPN1-201ENST00000216727 MYOZ3Q8TDC0 251 aa22.58■■□□□ 1.2
PABPN1-201ENST00000216727 TPPP3Q9BW30 176 aa22.58■■□□□ 1.2
PABPN1-201ENST00000216727 TEX29Q8N6K0 151 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 C20orf173Q96LM9 149 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 RPLP1P05386 114 aaKnown RBP22.57■■□□□ 1.2
PABPN1-201ENST00000216727 AMTP48728 403 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 LINC01559Q495D7 138 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 ZNF493Q6ZR52 646 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 ZNF575Q86XF7 245 aa22.57■■□□□ 1.2
PABPN1-201ENST00000216727 CTRLP40313 264 aa22.56■■□□□ 1.2
PABPN1-201ENST00000216727 HIST2H2BCQ6DN03 193 aa22.56■■□□□ 1.2
PABPN1-201ENST00000216727 LENEPQ9Y5L5 61 aa22.56■■□□□ 1.2
PABPN1-201ENST00000216727 IGLC6P0CF74 106 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 PRR31Q5SQ13 230 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 ZNF738Q8NE65 137 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 UFC1Q9Y3C8 167 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 HIST1H1AQ02539 215 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-201ENST00000216727 Q8N2B8 174 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 RNF152Q8N8N0 203 aa22.55■■□□□ 1.2
PABPN1-201ENST00000216727 LINC00587B1AMM8 73 aa22.54■■□□□ 1.2
PABPN1-201ENST00000216727 SCGB1D1O95968 90 aa22.54■■□□□ 1.2
PABPN1-201ENST00000216727 ORM1P02763 201 aa22.54■■□□□ 1.2
PABPN1-201ENST00000216727 OVOL1O14753 267 aa22.53■■□□□ 1.2
PABPN1-201ENST00000216727 FER1L6-AS1Q8NA97 138 aa22.53■■□□□ 1.2
PABPN1-201ENST00000216727 NAGKQ9UJ70 344 aa22.53■■□□□ 1.2
PABPN1-201ENST00000216727 ITPR3Q14573 2671 aa22.52■■□□□ 1.2
PABPN1-201ENST00000216727 PMCHP20382 165 aa22.52■■□□□ 1.2
PABPN1-201ENST00000216727 PKIAP61925 76 aa22.52■■□□□ 1.2
PABPN1-201ENST00000216727 LINC00477Q96M19 166 aa22.52■■□□□ 1.2
PABPN1-201ENST00000216727 LGALS1P09382 135 aaKnown RBP22.52■■□□□ 1.19
PABPN1-201ENST00000216727 RPL11P62913 178 aaKnown RBP22.52■■□□□ 1.19
PABPN1-201ENST00000216727 UBE2E2Q96LR5 201 aa22.52■■□□□ 1.19
PABPN1-201ENST00000216727 HSBP1O75506 76 aa22.5■■□□□ 1.19
PABPN1-201ENST00000216727 SAMD13Q5VXD3 122 aa22.5■■□□□ 1.19
PABPN1-201ENST00000216727 TMEM86BQ8N661 226 aa22.5■■□□□ 1.19
PABPN1-201ENST00000216727 CNFNQ9BYD5 112 aa22.5■■□□□ 1.19
PABPN1-201ENST00000216727 CD33P20138 364 aa22.49■■□□□ 1.19
PABPN1-201ENST00000216727 DMRTA1Q5VZB9 504 aa22.49■■□□□ 1.19
PABPN1-201ENST00000216727 NIT1Q86X76 327 aa22.49■■□□□ 1.19
PABPN1-201ENST00000216727 OR10J6PQ8NGY7 276 aa22.49■■□□□ 1.19
PABPN1-201ENST00000216727 URB1-AS1Q96HZ7 61 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms