RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 A0A1B0GV72 72 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 A0A1W2PPI3 338 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 HCP5Q6MZN7 132 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 OR4C13Q8NGP0 309 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 OR4A5Q8NH83 315 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 THYN1Q9P016 225 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 USP9XQ93008 2570 aaPredicted RBP7.54□□□□□ -1.2
PAX6-273ENST00000640610 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.54□□□□□ -1.2
PAX6-273ENST00000640610 GNG7O60262 68 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 IGHV1-8P0DP01 117 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 TMEM155Q4W5P6 130 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 PRSS57Q6UWY2 283 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 Q86TA4 180 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 SIGMAR1Q99720 223 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 NAA38Q9BRA0 125 aaKnown RBP7.54□□□□□ -1.2
PAX6-273ENST00000640610 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
PAX6-273ENST00000640610 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
PAX6-273ENST00000640610 ASH1LQ9NR48 2969 aaKnown RBP7.53□□□□□ -1.2
PAX6-273ENST00000640610 LY6HO94772 140 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 ABCA1O95477 2261 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 ABCA4P78363 2273 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 RPL24P83731 157 aaKnown RBP7.53□□□□□ -1.2
PAX6-273ENST00000640610 SAMD5Q5TGI4 173 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 TMEM190Q8WZ59 177 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 Q9H3A6 140 aa7.53□□□□□ -1.2
PAX6-273ENST00000640610 J3QR89 54 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 AZU1P20160 251 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 Q6AWC8 147 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 PPIAL4CA0A0B4J2A2 164 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 C22orf46C9J442 243 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 CT45A10P0DMU9 189 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 GP9P14770 177 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 ORM2P19652 201 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 SELENOKQ9Y6D0 94 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 ARHGAP32A7KAX9 2087 aa7.52□□□□□ -1.21
PAX6-273ENST00000640610 A0A096LNJ9 63 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 COX7A1P24310 79 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 CACNG7P62955 275 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 LINC00311Q8N616 119 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 TMEM133Q9H2Q1 129 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 NGBQ9NPG2 151 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 OTORQ9NRC9 128 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 H3BTX0 84 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 C19orf84I3L1E1 186 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 OVOL3O00110 214 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 PRB4P10163 310 aaPredicted RBP7.51□□□□□ -1.21
PAX6-273ENST00000640610 ZNF414Q96IQ9 312 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 TRGV9Q99603 122 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 INSIG2Q9Y5U4 225 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 TENM4Q6N022 2769 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
PAX6-273ENST00000640610 HBDP02042 147 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
PAX6-273ENST00000640610 CD300EQ496F6 205 aaPredicted RBP7.5□□□□□ -1.21
PAX6-273ENST00000640610 ZNF493Q6ZR52 646 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 CIARTQ8N365 385 aaPredicted RBP7.5□□□□□ -1.21
PAX6-273ENST00000640610 TMEM116Q8NCL8 245 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 ATP6V0BQ99437 205 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 HIGD1BQ9P298 99 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 KAAG1Q9UBP8 84 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 CD3EP07766 207 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 NMUP48645 174 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 VMA21Q3ZAQ7 101 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 PIFOQ8TCI5 191 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
PAX6-273ENST00000640610 VGLL1Q99990 258 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 DOPEY1Q5JWR5 2465 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 HOXB4P17483 251 aaPredicted RBP7.5□□□□□ -1.21
PAX6-273ENST00000640610 SRSF1Q07955 248 aaKnown RBP eCLIP7.5□□□□□ -1.21
PAX6-273ENST00000640610 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 PRNTQ86SH4 94 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 SIGLEC8Q9NYZ4 499 aa7.5□□□□□ -1.21
PAX6-273ENST00000640610 GAGE12HA6NDE8 117 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 VSTM5A8MXK1 200 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
PAX6-273ENST00000640610 GOSR1O95249 250 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 FOXI2Q6ZQN5 318 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 FBXL15Q9H469 300 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 ZFHX3Q15911 3703 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 TRAV8-1A0A0A6YYK1 113 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 IGHV1-3A0A0C4DH29 117 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 F8W1H4 67 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 IGLV1-47P01700 117 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 IGLV2-11P01706 119 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 CRYGCP07315 174 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 Q5PR19 223 aa7.49□□□□□ -1.21
PAX6-273ENST00000640610 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms