RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 LRRC20Q8TCA0 184 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 BLNKQ8WV28 456 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 SAT2Q96F10 170 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF503Q96F45 646 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 SLC50A1Q9BRV3 221 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 PSMG3Q9BT73 122 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-202ENST00000629570 MRPL32Q9BYC8 188 aaKnown RBP4.05□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF331Q9NQX6 463 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-202ENST00000629570 CYTL1Q9NRR1 136 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 RPRMQ9NS64 109 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 CLEC5AQ9NY25 188 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 TMEM14CQ9P0S9 112 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 RNF24Q9Y225 148 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 TIMM9Q9Y5J7 89 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 BORCS7-ASMTA0A0B4J1R7 106 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 HMSDA8MTL9 139 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF705FA8MVS1 300 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 PRAC2D3DTV9 90 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 M0R3E3 92 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 UBE2CO00762 179 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 HMGB3O15347 200 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR7C2O60412 319 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 HIST1H1EP10412 219 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 SPP1P10451 314 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 M6PRP20645 277 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 FXYD7P58549 80 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 RHOBP62745 196 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 UBE2L3P68036 154 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 HIST1H1AQ02539 215 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF345Q14585 488 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 PSG3Q16557 428 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 GUK1Q16774 197 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 ACOT6Q3I5F7 207 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 KHDC3LQ587J8 217 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 EBLN2Q6P2I7 272 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 FAM122CQ6P4D5 195 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 MORN3Q6PF18 240 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 AMTNQ6UX39 209 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 TCTE3Q8IZS6 198 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 EXOC3-AS1Q8N2X6 119 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 KCNRGQ8N5I3 272 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 RPP25LQ8N5L8 163 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 CSNK1G2-AS1Q8NCQ2 148 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR4B1Q8NGF8 309 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR10G4Q8NGN3 311 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR10G9Q8NGN4 311 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR10G7Q8NGN6 311 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR2G3Q8NGZ4 309 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 RPUSD4Q96CM3 377 aaKnown RBP4.04□□□□□ -1.76
LINC00550-202ENST00000629570 RNF183Q96D59 192 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 FXYD5Q96DB9 178 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 PHYHIPLQ96FC7 376 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 PAXXQ9BUH6 204 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 SLC35B3Q9H1N7 401 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 OR51M1Q9H341 326 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 EDA2RQ9HAV5 297 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 XCL2Q9UBD3 114 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 TP53TG1Q9Y2A0 90 aa4.04□□□□□ -1.76
LINC00550-202ENST00000629570 A0A0J9YWU9 116 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 A0A1W2PPV4 95 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 A8MTW9 85 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 M0R2Z0 102 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 TAAR5O14804 337 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 BCL2L11O43521 198 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF253O75346 499 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 JTBO76095 146 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 NBEAP1P0C6P0 100 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 ARL14EPLP0DKL9 152 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 CDC34P49427 236 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-202ENST00000629570 TAS2R45P59539 299 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 NUTF2P61970 127 aaKnown RBP4.03□□□□□ -1.76
LINC00550-202ENST00000629570 SERF2P84101 59 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 PSG9Q00887 426 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 PDE6HQ13956 83 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 ICAM4Q14773 271 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 TMEM41BQ5BJD5 291 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 SSX7Q7RTT5 188 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 AKAP14Q86UN6 197 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 OR8A1Q8NGG7 326 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 OR11H2Q8NH07 326 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 GNPNAT1Q96EK6 184 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-202ENST00000629570 CLUHP3Q96NS8 147 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 RARRES2Q99969 163 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 ARPC5LQ9BPX5 153 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
LINC00550-202ENST00000629570 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 IGKV2-40A0A087WW87 121 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 A0A0D9SG52 128 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 KANTRA0A1W2PQU2 76 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 DEFB4AO15263 64 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 DUSP14O95147 198 aaKnown RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 IGKV2D-40P01614 121 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 C1QBP02746 253 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 STAG3L2P0CL84 134 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 STAG3L3P0CL85 134 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 FHITP49789 147 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 RANP62826 216 aaKnown RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF726P1Q15940 193 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms