RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 A0A087X0K7 114 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 SLC17A3O00476 420 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 NDUFB4O95168 129 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 TAGLN2P37802 199 aaKnown RBP9.4□□□□□ -0.9
PNKP-217ENST00000625216 C1orf194Q5T5A4 169 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 CST9LP1Q5W188 147 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.9
PNKP-217ENST00000625216 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 WFDC10AQ9H1F0 79 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 SMPXQ9UHP9 88 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 RNF24Q9Y225 148 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
PNKP-217ENST00000625216 DYNC2H1Q8NCM8 4307 aaKnown RBP9.39□□□□□ -0.91
PNKP-217ENST00000625216 TRBV19A0A075B6N1 114 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 LOC102724200A0A096LPH7 203 aaPredicted RBP9.39□□□□□ -0.91
PNKP-217ENST00000625216 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 CHEK1O14757 476 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 SFTA3P0C7M3 94 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 BMI1P35226 326 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
PNKP-217ENST00000625216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
PNKP-217ENST00000625216 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
PNKP-217ENST00000625216 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 GPR82Q96P67 336 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 RHPN1-AS1Q9BWJ2 59 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 Q9H3A6 140 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 SMDT1Q9H4I9 107 aa9.38□□□□□ -0.91
PNKP-217ENST00000625216 A0A1W2PS18 150 aa9.37□□□□□ -0.91
PNKP-217ENST00000625216 NDUFS6O75380 124 aaKnown RBP9.37□□□□□ -0.91
PNKP-217ENST00000625216 GALR1P47211 349 aa9.37□□□□□ -0.91
PNKP-217ENST00000625216 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
PNKP-217ENST00000625216 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
PNKP-217ENST00000625216 C11orf52Q96A22 123 aa9.37□□□□□ -0.91
PNKP-217ENST00000625216 GRAMD2BQ96HH9 432 aa9.37□□□□□ -0.91
PNKP-217ENST00000625216 TXNDC17Q9BRA2 123 aa9.37□□□□□ -0.91
PNKP-217ENST00000625216 F6UZH7 168 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 TMEM250H0YL14 139 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 UBE2CO00762 179 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 CEBPGP53567 150 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 APOC4P55056 127 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 GNG5P63218 68 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 PDE6HQ13956 83 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 EXOC3-AS1Q8N2X6 119 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 RETNQ9HD89 108 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
PNKP-217ENST00000625216 KIR2DL5BA0A0G2JN68 375 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 KIR2DL5BA0A0G2JPC4 375 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 PGPA6NDG6 321 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 KRBOX1C9JBD0 128 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 F8W036 122 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 PDE6DO43924 150 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 ZNF253O75346 499 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
PNKP-217ENST00000625216 S100A1P23297 94 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 Q6ZWC4 215 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 KIR2DL5AQ8N109 375 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 PARLQ9H300 379 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
PNKP-217ENST00000625216 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
PNKP-217ENST00000625216 CARHSP1Q9Y2V2 147 aaKnown RBP9.35□□□□□ -0.91
PNKP-217ENST00000625216 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 M0R3E3 92 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 PEX7O00628 323 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 SOCS3O14543 225 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 PRB4P10163 310 aaPredicted RBP9.34□□□□□ -0.91
PNKP-217ENST00000625216 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 ZFAND6Q6FIF0 208 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 C2CD4CQ8TF44 421 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 RPUSD4Q96CM3 377 aaKnown RBP9.34□□□□□ -0.91
PNKP-217ENST00000625216 OVOL2Q9BRP0 275 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 DERL1Q9BUN8 251 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 NKX6-2Q9C056 277 aaPredicted RBP9.34□□□□□ -0.91
PNKP-217ENST00000625216 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
PNKP-217ENST00000625216 IGKV3-7A0A075B6H7 116 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 HELTA6NFD8 242 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 ZNF674Q2M3X9 581 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms