RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZNF747Q9BV97 191 aa7.24□□□□□ -1.25
VCL-206ENST00000623461 DENND4AQ7Z401 1863 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 LEPROTO15243 131 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 TCF15Q12870 199 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 TEX48A0A1B0GUV7 120 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 TFF1P04155 84 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 ARTNQ5T4W7 220 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 C9orf139Q6ZV77 190 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 PHLDA1Q8WV24 401 aaPredicted RBP7.23□□□□□ -1.25
VCL-206ENST00000623461 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 IGHG4P01861 327 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 HLA-DRB4P13762 266 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 PMVKQ15126 192 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 Q6ZVH6 145 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 HLA-DRB4X5D2U9 266 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 WIPF3A6NGB9 483 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 SAP30O75446 220 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 C10orf55Q5SWW7 151 aa7.23□□□□□ -1.25
VCL-206ENST00000623461 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 NPYP01303 97 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 SLC25A16P16260 332 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 PLA2G2EQ9NZK7 142 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 SHISA9B4DS77 424 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 TMEM14CQ9P0S9 112 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 IGHV1-18A0A0C4DH31 117 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 MYOD1P15172 320 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 E9PLN8 166 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 FGF6P10767 208 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 LMO1P25800 156 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 F8VRH5 84 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 NDUFS7O75251 213 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 ACYP1P07311 99 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 LY6G5BQ8NDX9 201 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 NUPR1O60356 82 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
VCL-206ENST00000623461 CDK2AP2O75956 126 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 LINC00158P58513 81 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 LINC01587Q99440 93 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 IGHV3OR16-8A0A075B7F1 116 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 K7ERJ3 54 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 WNT2P09544 360 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 ANKRD29Q8N6D5 301 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 C15orf53Q8NAA6 179 aa7.21□□□□□ -1.25
VCL-206ENST00000623461 ETV2O00321 342 aaPredicted RBP7.21□□□□□ -1.26
VCL-206ENST00000623461 TDRG1Q3Y452 100 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 LINC01545Q5VT33 79 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 COLCA1Q6ZS62 124 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 SOCS3O14543 225 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 PAX8Q06710 450 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 NPC2P61916 151 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 KLRD1Q13241 179 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 GVINP1Q7Z2Y8 2422 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 A0A087WX48 190 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 IGLV3-1P01715 115 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 ZNF876PQ49A33 203 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 LRRK1Q38SD2 2015 aa7.21□□□□□ -1.26
VCL-206ENST00000623461 TCF20Q9UGU0 1960 aaKnown RBP7.21□□□□□ -1.26
VCL-206ENST00000623461 IGLL5B9A064 214 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 FAM168AQ92567 244 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 PRR19A6NJB7 356 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 TMEM200BQ69YZ2 307 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 IGHV1-46P01743 117 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 METRNQ9UJH8 293 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 TET1Q8NFU7 2136 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 IGHV1-3A0A0C4DH29 117 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 VWC2LB2RUY7 222 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 TIMM23O14925 209 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 C9orf106Q8NAJ2 232 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 Q8TAT8 98 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 NDUFA4L2Q9NRX3 87 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 SPAARA0A1B0GVQ0 90 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 CD24P25063 80 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 MRPL35Q9NZE8 188 aaKnown RBP7.2□□□□□ -1.26
VCL-206ENST00000623461 SIGLEC9Q9Y336 463 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 TRBV19A0A075B6N1 114 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 LY6EQ16553 131 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 MLANAQ16655 118 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 UBE2DNLQ8IWF7 75 aa7.2□□□□□ -1.26
VCL-206ENST00000623461 C14orf178Q8N769 122 aaPredicted RBP7.2□□□□□ -1.26
VCL-206ENST00000623461 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 IGHV1-8P0DP01 117 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 CRYBA4P53673 196 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 PRR20EP86478 221 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 PRR20CP86479 221 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 PRR20DP86480 221 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 PRR20BP86481 221 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 PRR20AP86496 221 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 K7EMI3 77 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 LTAP01374 205 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 ZNF883P0CG24 379 aa7.19□□□□□ -1.26
VCL-206ENST00000623461 BSPH1Q075Z2 132 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms