RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
SGMS1-208ENST00000608287 DYNC1H1Q14204 4646 aaKnown RBP13.77□□□□□ -0.2
SGMS1-208ENST00000608287 ZNF705FA8MVS1 300 aaPredicted RBP13.77□□□□□ -0.21
SGMS1-208ENST00000608287 SLC17A3O00476 420 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 RHOBP62745 196 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 GUK1Q16774 197 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 SPINK13Q1W4C9 94 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 ZNF575Q86XF7 245 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 MAPKAPK5-AS1Q8N8E1 139 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 OR8A1Q8NGG7 326 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 NEU1Q99519 415 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 SMIM3Q9BZL3 60 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 KCNIP2Q9NS61 270 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 DNAH17Q9UFH2 4485 aa13.77□□□□□ -0.21
SGMS1-208ENST00000608287 C17orf112F2Z3M2 114 aa13.76□□□□□ -0.21
SGMS1-208ENST00000608287 M0R2Z0 102 aa13.76□□□□□ -0.21
SGMS1-208ENST00000608287 FCN2Q15485 313 aa13.76□□□□□ -0.21
SGMS1-208ENST00000608287 SAT2Q96F10 170 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-208ENST00000608287 PPP1R14DQ9NXH3 145 aa13.76□□□□□ -0.21
SGMS1-208ENST00000608287 SMIM9A6NGZ8 99 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 IFNA5P01569 189 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 C1orf158Q8N1D5 194 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 IGF2BP2-AS1Q96M15 143 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 TMEM208Q9BTX3 173 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 NDUFAF3Q9BU61 184 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 ZNF586Q9NXT0 402 aa13.75□□□□□ -0.21
SGMS1-208ENST00000608287 BOLA2-SMG1P6H3BVE0 249 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 M0R2N4 97 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 TMEM14CQ9P0S9 112 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 CELA1Q9UNI1 258 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 RFNGQ9Y644 331 aa13.74□□□□□ -0.21
SGMS1-208ENST00000608287 INSP01308 110 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 HBE1P02100 147 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 PYYP10082 97 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 EMP1P54849 157 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 RGS21Q2M5E4 152 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 Q6ZTC4 211 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 MIR17HGQ75NE6 70 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 TIMM9Q9Y5J7 89 aa13.73□□□□□ -0.21
SGMS1-208ENST00000608287 TRBV19A0A075B6N1 114 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 PRAC2D3DTV9 90 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 CRXO43186 299 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-208ENST00000608287 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
SGMS1-208ENST00000608287 BAP18Q8IXM2 172 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 OR10J6PQ8NGY7 276 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 BLNKQ8WV28 456 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 SLC25A2Q9BXI2 301 aa13.72□□□□□ -0.21
SGMS1-208ENST00000608287 ZNF253O75346 499 aa13.71□□□□□ -0.21
SGMS1-208ENST00000608287 RRN3P1Q2M238 152 aa13.71□□□□□ -0.21
SGMS1-208ENST00000608287 FFAR4Q5NUL3 377 aa13.71□□□□□ -0.21
SGMS1-208ENST00000608287 ZNF767PQ75MW2 155 aa13.71□□□□□ -0.21
SGMS1-208ENST00000608287 MRPL32Q9BYC8 188 aaKnown RBP13.71□□□□□ -0.21
SGMS1-208ENST00000608287 WFDC1Q9HC57 220 aa13.71□□□□□ -0.21
SGMS1-208ENST00000608287 DEFB131BA0A096LNP1 70 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 C16orf90A8MZG2 172 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 UBE2DNLQ8IWF7 75 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 FUT9Q9Y231 359 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 PKD1P98161 4303 aa13.7□□□□□ -0.22
SGMS1-208ENST00000608287 GIPP09681 153 aaPredicted RBP13.69□□□□□ -0.22
SGMS1-208ENST00000608287 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
SGMS1-208ENST00000608287 PDE6HQ13956 83 aa13.69□□□□□ -0.22
SGMS1-208ENST00000608287 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
SGMS1-208ENST00000608287 Q8N1X5 172 aa13.69□□□□□ -0.22
SGMS1-208ENST00000608287 PARD6GQ9BYG4 376 aaPredicted RBP13.69□□□□□ -0.22
SGMS1-208ENST00000608287 OR51M1Q9H341 326 aa13.69□□□□□ -0.22
SGMS1-208ENST00000608287 NDUFB4O95168 129 aa13.68□□□□□ -0.22
SGMS1-208ENST00000608287 CDKN1BP46527 198 aa13.68□□□□□ -0.22
SGMS1-208ENST00000608287 C1orf134Q5TEV5 83 aa13.68□□□□□ -0.22
SGMS1-208ENST00000608287 MRPL53Q96EL3 112 aaKnown RBP13.68□□□□□ -0.22
SGMS1-208ENST00000608287 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
SGMS1-208ENST00000608287 ZNF705GA8MUZ8 300 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-208ENST00000608287 M0R3E3 92 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 OR7C2O60412 319 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 NBEAP1P0C6P0 100 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 Q5BKY6 102 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 Q6ZR54 194 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 EXOC3-AS1Q8N2X6 119 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 ASB13Q8WXK3 278 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 AAMDCQ9H7C9 122 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 PRELID1Q9Y255 219 aa13.67□□□□□ -0.22
SGMS1-208ENST00000608287 PRM2P04554 102 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 OR10J4P0C629 311 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 TSPOP30536 169 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 OXA1LQ15070 435 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 FAM222AQ5U5X8 452 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 TMEM256Q8N2U0 113 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 RNF141Q8WVD5 230 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 LINC01587Q99440 93 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 YTHDF2Q9Y5A9 579 aaKnown RBP13.66□□□□□ -0.22
SGMS1-208ENST00000608287 HSPG2P98160 4391 aa13.66□□□□□ -0.22
SGMS1-208ENST00000608287 TEX48A0A1B0GUV7 120 aa13.65□□□□□ -0.22
SGMS1-208ENST00000608287 NPIPB6E9PJ23 425 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms