RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, human

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-204	ENST00000602492	ZNF575	Q86XF7	245 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492	C15orf53	Q8NAA6	179 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492	RSG1	Q9BU20	258 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492	SLC25A32	Q9H2D1	315 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492	SLC25A22	Q9H936	323 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492	NPVF	Q9HCQ7	196 aa		14.3	□□□□□ -0.12
PPFIA3-204	ENST00000602492		A8MTW9	85 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	IFNA5	P01569	189 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	CLINT1	Q14677	625 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	AMTN	Q6UX39	209 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	TMEM144	Q7Z5S9	345 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	CYTL1	Q9NRR1	136 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	SLC45A2	Q9UMX9	530 aa		14.29	□□□□□ -0.12
PPFIA3-204	ENST00000602492	ZNF98	A6NK75	572 aa		14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	TPT1	P13693	172 aa	Known RBP	14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	FAM3B	P58499	235 aa	Predicted RBP	14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	ZNF471	Q9BX82	626 aa	Predicted RBP	14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	ARV1	Q9H2C2	271 aa		14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	WDR83OS	Q9Y284	106 aa		14.28	□□□□□ -0.12
PPFIA3-204	ENST00000602492	EIF5AL1	Q6IS14	154 aa	Known RBP	14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	BPIFC	Q8NFQ6	507 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	GNPNAT1	Q96EK6	184 aa	Predicted RBP	14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	PHYHIPL	Q96FC7	376 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	ATG101	Q9BSB4	218 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SMIM3	Q9BZL3	60 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	WDR61	Q9GZS3	305 aa	Known RBP	14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	WFDC1	Q9HC57	220 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	KCNIP2	Q9NS61	270 aa		14.27	□□□□□ -0.13
PPFIA3-204	ENST00000602492	LYRM9	A8MSI8	78 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	DUSP14	O95147	198 aa	Known RBP	14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	INS	P01308	110 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	S100A7	P31151	101 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	CNN1	P51911	297 aa	Known RBP	14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	AKR1C1	Q04828	323 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	RAB31	Q13636	194 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	RPL7L1	Q6DKI1	246 aa	Known RBP	14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	TEPP	Q6URK8	271 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	OR1B1	Q8NGR6	318 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SCGB1C1	Q8TD33	95 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	C17orf77	Q96MU5	243 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	GPR82	Q96P67	336 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	TIMM9	Q9Y5J7	89 aa		14.26	□□□□□ -0.13
PPFIA3-204	ENST00000602492	LRP1B	Q9NZR2	4599 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	UBE2L5P	A0A1B0GUS4	154 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	ZNF705G	A8MUZ8	300 aa	Predicted RBP	14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492		M0R2Z0	102 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	ORM2	P19652	201 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SPINK13	Q1W4C9	94 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	BAP18	Q8IXM2	172 aa		14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	PSMG3	Q9BT73	122 aa	Predicted RBP	14.25	□□□□□ -0.13
PPFIA3-204	ENST00000602492	GATA2	P23769	480 aa	Predicted RBP	14.24	□□□□□ -0.13
PPFIA3-204	ENST00000602492	B2M	P61769	119 aa		14.24	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SMCO3	A2RU48	225 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	C17orf112	F2Z3M2	114 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	CRX	O43186	299 aa	Predicted RBP	14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	PRM2	P04554	102 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	DEFB130B	P0DP73	79 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	DEFB130A	P0DP74	79 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SELENOT	P62341	195 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	IGFL4	Q6B9Z1	124 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	BOLA1	Q9Y3E2	137 aa		14.23	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SEC11B	P0C7V7	166 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	FGF7	P21781	194 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	TSPO	P30536	169 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	SERF2	P84101	59 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	RNF182	Q8N6D2	247 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	OR2G3	Q8NGZ4	309 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	NPCDR1	Q9BY65	106 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	KRTAP4-5	Q9BYR2	181 aa		14.22	□□□□□ -0.13
PPFIA3-204	ENST00000602492	TRAV8-2	A0A0B4J237	113 aa		14.21	□□□□□ -0.13
PPFIA3-204	ENST00000602492		F5H768	121 aa		14.21	□□□□□ -0.13
PPFIA3-204	ENST00000602492	TMEM182	Q6ZP80	229 aa	Predicted RBP	14.21	□□□□□ -0.13
PPFIA3-204	ENST00000602492	ZNF738	Q8NE65	137 aa		14.21	□□□□□ -0.13
PPFIA3-204	ENST00000602492	NBDY	A0A0U1RRE5	68 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	C16orf90	A8MZG2	172 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	NUDT3	O95989	172 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	ATP6V0C	P27449	155 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	RPL29	P47914	159 aa	Known RBP	14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	CAMLG	P49069	296 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	TNP2	Q05952	138 aa		14.2	□□□□□ -0.14
PPFIA3-204	ENST00000602492	TRAV12-2	A0A075B6T6	113 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492		H3BRN7	92 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	AGPAT2	O15120	278 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	HSD17B11	Q8NBQ5	300 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	ZNRF2	Q8NHG8	242 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	MGST2	Q99735	147 aa		14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	14.19	□□□□□ -0.14
PPFIA3-204	ENST00000602492	UMAD1	C9J7I0	102 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	IFNA7	P01567	189 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	ATP5G1	P05496	136 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	RPL7	P18124	248 aa	Known RBP	14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	AZU1	P20160	251 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	ATP5G3	P48201	142 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	CCL18	P55774	89 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	RHOB	P62745	196 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	PXDC1	Q5TGL8	231 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	TEX261	Q6UWH6	196 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	CYP2G1P	Q6ZSU1	146 aa		14.18	□□□□□ -0.14
PPFIA3-204	ENST00000602492	TMEM256	Q8N2U0	113 aa		14.18	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms