RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 RPL35P42766 123 aaKnown RBP7.64□□□□□ -1.19
UPF1-213ENST00000601981 TAS2R60P59551 318 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 PDE6HQ13956 83 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 LCN12Q6JVE5 192 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 LYPD1Q8N2G4 141 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 GRAMD2BQ96HH9 432 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 GPR82Q96P67 336 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 Q9H3A6 140 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 TRBV20OR9-2A0A075B6H5 130 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 HELTA6NFD8 242 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 IGLV1-51P01701 117 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 SLC25A5P05141 298 aaKnown RBP7.63□□□□□ -1.19
UPF1-213ENST00000601981 CNN1P51911 297 aaKnown RBP7.63□□□□□ -1.19
UPF1-213ENST00000601981 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
UPF1-213ENST00000601981 RNF212Q495C1 297 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 C1orf194Q5T5A4 169 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 ISOC2Q96AB3 205 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 IGF2BP2-AS1Q96M15 143 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
UPF1-213ENST00000601981 IGHV3OR16-8A0A075B7F1 116 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 A0A087X0K7 114 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 IGHV7-4-1A0A0J9YVY3 117 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 PGPA6NDG6 321 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 COLCA2A8K830 154 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 ZNF207O43670 478 aaKnown RBP7.62□□□□□ -1.19
UPF1-213ENST00000601981 ZNF253O75346 499 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 S100A9P06702 114 aaKnown RBP7.62□□□□□ -1.19
UPF1-213ENST00000601981 GNG4P50150 75 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 EGFEM1PQ0D2K5 195 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
UPF1-213ENST00000601981 SIGLEC15Q6ZMC9 328 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 RBPMS2Q6ZRY4 209 aaKnown RBP7.62□□□□□ -1.19
UPF1-213ENST00000601981 YPEL4Q96NS1 127 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 ATG101Q9BSB4 218 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 ZNF256Q9Y2P7 627 aaPredicted RBP7.62□□□□□ -1.19
UPF1-213ENST00000601981 U3KQE9 123 aa7.62□□□□□ -1.19
UPF1-213ENST00000601981 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 H3BTX0 84 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 H7BYZ3 331 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 PPP1R2P9O14990 202 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 BUB3O43684 328 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TCRAP04437 139 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
UPF1-213ENST00000601981 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
UPF1-213ENST00000601981 PSG9Q00887 426 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 BEAN1Q3B7T3 259 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 KPRPQ5T749 579 aaPredicted RBP7.61□□□□□ -1.19
UPF1-213ENST00000601981 OR8I2Q8N0Y5 310 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 ARL6IP6Q8N6S5 226 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 OCC1Q8TAD7 63 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 RHPN1-AS1Q9BWJ2 59 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 SMPXQ9UHP9 88 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
UPF1-213ENST00000601981 KLF12Q9Y4X4 402 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TGP01266 2768 aa7.61□□□□□ -1.19
UPF1-213ENST00000601981 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 PGPEP1LA6NFU8 196 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 GALR1P47211 349 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 MEOX2P50222 304 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 UBE2G1P62253 170 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 GNG5P63218 68 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 PAFAH1B2P68402 229 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 DEFB114Q30KQ6 69 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 CD300EQ496F6 205 aaPredicted RBP7.6□□□□□ -1.19
UPF1-213ENST00000601981 GTSCR1Q86UQ5 136 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 CMTM2Q8TAZ6 248 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 SFRP2Q96HF1 295 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 AAMDCQ9H7C9 122 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 MLXQ9UH92 298 aa7.6□□□□□ -1.19
UPF1-213ENST00000601981 SERTM2A0A1B0GWG4 89 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 K7EN84 100 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 SLC17A3O00476 420 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 CHEK1O14757 476 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 GCGP01275 180 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 IGLV2-8P01709 118 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 ELOBQ15370 118 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 C16orf54Q6UWD8 224 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 EXOC3-AS1Q8N2X6 119 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 FAM24BQ8N5W8 94 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
UPF1-213ENST00000601981 SMAD5-AS1Q9Y6J3 95 aa7.59□□□□□ -1.19
UPF1-213ENST00000601981 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 IGHV3-49A0A0A0MS15 119 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 OR4C46A6NHA9 309 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 K7EQM0 130 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 ISLRO14498 428 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 EDN2P20800 178 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 S100PP25815 95 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms