RNA–Protein interactions for RNA: ENST00000600479.5

PLD3-222, Transcript of phospholipase D family member 3, human

TSL 4

Gene PLD3, Length 477 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-222	ENST00000600479	CTXND1	A0A1B0GTU2	59 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	UMAD1	C9J7I0	102 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	EIF3G	O75821	320 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	GIG44	P09565	113 aa	Predicted RBP	11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	CNN1	P51911	297 aa	Known RBP	11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	C9orf62	Q8N4C0	152 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	OR4B1	Q8NGF8	309 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	RNF183	Q96D59	192 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	OVOL2	Q9BRP0	275 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	C1QTNF4	Q9BXJ3	329 aa		11.85	□□□□□ -0.51
PLD3-222	ENST00000600479	HMGB3	O15347	200 aa	Known RBP	11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	SPRY2	O43597	315 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	CXorf1	O96002	111 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	ARL14EPL	P0DKL9	152 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	DEFB135	Q30KP9	77 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	PHYHIPL	Q96FC7	376 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	RETN	Q9HD89	108 aa		11.84	□□□□□ -0.51
PLD3-222	ENST00000600479	TG	P01266	2768 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	IGKV3-20	P01619	116 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	HIST1H1A	Q02539	215 aa	Predicted RBP	11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	ICAM4	Q14773	271 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	ZNF726P1	Q15940	193 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	EIF5AL1	Q6IS14	154 aa	Known RBP	11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	AMTN	Q6UX39	209 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	SLC51B	Q86UW2	128 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	EXOC3-AS1	Q8N2X6	119 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	OR10J6P	Q8NGY7	276 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	SUN5	Q8TC36	379 aa		11.83	□□□□□ -0.52
PLD3-222	ENST00000600479	PRAC2	D3DTV9	90 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479		M0R3E3	92 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	ZNF705D	P0CH99	300 aa	Predicted RBP	11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	ZNF705B	P0CI00	300 aa	Predicted RBP	11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	GCHFR	P30047	84 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	RAN	P62826	216 aa	Known RBP	11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	DPPA3	Q6W0C5	159 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	SSX7	Q7RTT5	188 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479		Q9H3A6	140 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	TMEM167B	Q9NRX6	74 aa		11.82	□□□□□ -0.52
PLD3-222	ENST00000600479	COL7A1	Q02388	2944 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	AMBP	P02760	352 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	CSNK1G2-AS1	Q8NCQ2	148 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	TMED6	Q8WW62	240 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	OTOR	Q9NRC9	128 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	PLA2G2E	Q9NZK7	142 aa		11.81	□□□□□ -0.52
PLD3-222	ENST00000600479	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	NPIPB6	E9PJ23	425 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	CSN1S1	P47710	185 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	FAM74A1	Q5RGS3	127 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	ARL6IP6	Q8N6S5	226 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	RXFP4	Q8TDU9	374 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	SLC35B3	Q9H1N7	401 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	XCL2	Q9UBD3	114 aa		11.8	□□□□□ -0.52
PLD3-222	ENST00000600479	MAP1LC3B2	A6NCE7	125 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	BOLA2-SMG1P6	H3BVE0	249 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	FHIT	P49789	147 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	RAB5C	P51148	216 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	ODF3	Q96PU9	254 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	MAP1LC3B	Q9GZQ8	125 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	PPP1R14D	Q9NXH3	145 aa		11.79	□□□□□ -0.52
PLD3-222	ENST00000600479	FXYD7	P58549	80 aa		11.78	□□□□□ -0.52
PLD3-222	ENST00000600479	FAM213B	Q8TBF2	198 aa		11.78	□□□□□ -0.52
PLD3-222	ENST00000600479	MBD3L1	Q8WWY6	194 aa		11.78	□□□□□ -0.52
PLD3-222	ENST00000600479	LINC00477	Q96M19	166 aa		11.78	□□□□□ -0.52
PLD3-222	ENST00000600479	RARRES2	Q99969	163 aa		11.78	□□□□□ -0.52
PLD3-222	ENST00000600479	NBEAL2	Q6ZNJ1	2754 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	RBAKDN	A6NC62	111 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	PGP	A6NDG6	321 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	SLC25A5	P05141	298 aa	Known RBP	11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	PRB4	P10163	310 aa	Predicted RBP	11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	SPINK13	Q1W4C9	94 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	C9orf47	Q6ZRZ4	202 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	IQCF2	Q8IXL9	164 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	OR11H2	Q8NH07	326 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	CMTM2	Q8TAZ6	248 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479	IGF2BP2-AS1	Q96M15	143 aa		11.77	□□□□□ -0.53
PLD3-222	ENST00000600479		A0A1W2PRE2	83 aa		11.76	□□□□□ -0.53
PLD3-222	ENST00000600479		M0R2Z0	102 aa		11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	TSPO	P30536	169 aa		11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	NKX2-5	P52952	324 aa	Predicted RBP	11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	FGF8	P55075	233 aa	Predicted RBP	11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	WWC2-AS2	Q96NR7	200 aa		11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	EDA2R	Q9HAV5	297 aa		11.76	□□□□□ -0.53
PLD3-222	ENST00000600479	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	DIRC3	C9JPN6	131 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	CRX	O43186	299 aa	Predicted RBP	11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	INS	P01308	110 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	IGKV2D-40	P01614	121 aa	Predicted RBP	11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	H2AFB1	P0C5Y9	115 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	CT45A10	P0DMU9	189 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	CDKN1B	P46527	198 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	SULT1A2	P50226	295 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	TMEM78	Q5T7P6	136 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	C5orf17	Q8NAS9	161 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	SFT2D1	Q8WV19	159 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	AGPAT4-IT1	Q9H0P7	198 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	TMPRSS5	Q9H3S3	457 aa		11.75	□□□□□ -0.53
PLD3-222	ENST00000600479	GOLT1B	Q9Y3E0	138 aa		11.75	□□□□□ -0.53

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