RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FUSP35637 526 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSBP4-207ENST00000600244 EIF2B2P49770 351 aaKnown RBP12.28□□□□□ -0.44
SSBP4-207ENST00000600244 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
SSBP4-207ENST00000600244 LYZP61626 148 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 ZNF266Q14584 549 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 Q6ZSN1 163 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 HYLS1Q96M11 299 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 TAAR5O14804 337 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 CCL18P55774 89 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 KRTAP10-1P60331 282 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
SSBP4-207ENST00000600244 Q9H8V8 135 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 PXMP4Q9Y6I8 212 aa12.27□□□□□ -0.45
SSBP4-207ENST00000600244 A0A1W2PS18 150 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 HYPMO75409 117 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 ORM2P19652 201 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 B2MP61769 119 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 RPL7L1Q6DKI1 246 aaKnown RBP12.26□□□□□ -0.45
SSBP4-207ENST00000600244 C16orf54Q6UWD8 224 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 GLMPQ8WWB7 406 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 TMEM37Q8WXS4 190 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 RSG1Q9BU20 258 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 PBDC1Q9BVG4 233 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 ARL6Q9H0F7 186 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 ARV1Q9H2C2 271 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 TIMM9Q9Y5J7 89 aa12.26□□□□□ -0.45
SSBP4-207ENST00000600244 H3BMM0 161 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 TTC32Q5I0X7 151 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 C1orf194Q5T5A4 169 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 Q9H3A6 140 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
SSBP4-207ENST00000600244 C17orf112F2Z3M2 114 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 H3BRN7 92 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 DAD1P61803 113 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 Q6ZRG5 221 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 PSMG3Q9BT73 122 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-207ENST00000600244 SHANK2-AS3Q9BTD1 123 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 SLC25A39Q9BZJ4 359 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-207ENST00000600244 DNAJC4Q9NNZ3 241 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 DOK5Q9P104 306 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 PLA2G2DQ9UNK4 145 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
SSBP4-207ENST00000600244 YTHDF2Q9Y5A9 579 aaKnown RBP12.24□□□□□ -0.45
SSBP4-207ENST00000600244 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 BCL2L11O43521 198 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 NUDT3O95989 172 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 ICAM4Q14773 271 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 ZFP69Q49AA0 526 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 OR2G3Q8NGZ4 309 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
SSBP4-207ENST00000600244 UHRF2Q96PU4 802 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 PFDN5Q99471 154 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
SSBP4-207ENST00000600244 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 OR5G3P0C626 314 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 GCSAMLQ5JQS6 135 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 MORN5Q5VZ52 161 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
SSBP4-207ENST00000600244 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 OR1L4Q8NGR5 311 aa12.22□□□□□ -0.45
SSBP4-207ENST00000600244 A0A1W2PPQ1 181 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 HELTA6NFD8 242 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 COX7A2P2O60397 106 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 S100A7P31151 101 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 C10orf113Q5VZT2 155 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 LINC00305Q7Z4B0 112 aa12.21□□□□□ -0.45
SSBP4-207ENST00000600244 RNF213Q63HN8 5207 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 KANTRA0A1W2PQU2 76 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
SSBP4-207ENST00000600244 SERF2P84101 59 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 FFAR4Q5NUL3 377 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
SSBP4-207ENST00000600244 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 SLC25A32Q9H2D1 315 aa12.2□□□□□ -0.46
SSBP4-207ENST00000600244 LRP1Q07954 4544 aaKnown RBP12.19□□□□□ -0.46
SSBP4-207ENST00000600244 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
SSBP4-207ENST00000600244 SIGLEC15Q6ZMC9 328 aa12.19□□□□□ -0.46
SSBP4-207ENST00000600244 S100A7AQ86SG5 101 aa12.19□□□□□ -0.46
SSBP4-207ENST00000600244 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
SSBP4-207ENST00000600244 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
SSBP4-207ENST00000600244 HLA-DRB4P13762 266 aa12.18□□□□□ -0.46
SSBP4-207ENST00000600244 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
SSBP4-207ENST00000600244 GPR82Q96P67 336 aa12.18□□□□□ -0.46
SSBP4-207ENST00000600244 SEPSECSQ9HD40 501 aaKnown RBP12.18□□□□□ -0.46
SSBP4-207ENST00000600244 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
SSBP4-207ENST00000600244 HLA-DRB4X5D2U9 266 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms