RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RPL29P47914 159 aaKnown RBP10.37□□□□□ -0.75
PNKP-202ENST00000593706 S100A7AQ86SG5 101 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 SLC17A3O00476 420 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
PNKP-202ENST00000593706 PRM2P04554 102 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 B2MP61769 119 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 HBG1P69891 147 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 HBG2P69892 147 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
PNKP-202ENST00000593706 SLC39A9Q9NUM3 307 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 RNF24Q9Y225 148 aa10.36□□□□□ -0.75
PNKP-202ENST00000593706 APOBP04114 4563 aaKnown RBP10.35□□□□□ -0.75
PNKP-202ENST00000593706 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 H3BQ15 152 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 BOLA2-SMG1P6H3BVE0 249 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 ATP5G1P05496 136 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 TSPOP30536 169 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 ATP5G3P48201 142 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 CCL18P55774 89 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 DEFA1P59665 94 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 DEFA3P59666 94 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 NHLH2Q02577 135 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 RAB31Q13636 194 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 LCN15Q6UWW0 184 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 OR8A1Q8NGG7 326 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 ZNRF2Q8NHG8 242 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 SAT2Q96F10 170 aaPredicted RBP10.35□□□□□ -0.75
PNKP-202ENST00000593706 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
PNKP-202ENST00000593706 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 E5RGE8 158 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 CDK2AP2O75956 126 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 RHOBP62745 196 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
PNKP-202ENST00000593706 BAXQ07812 192 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 PSG3Q16557 428 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 ATP6V1FQ16864 119 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 LRRC37A5PQ49AS3 106 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 NPCDR1Q9BY65 106 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
PNKP-202ENST00000593706 MPDU1O75352 247 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 SNRPCP09234 159 aaKnown RBP10.33□□□□□ -0.76
PNKP-202ENST00000593706 HTN1P15515 57 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 FGF7P21781 194 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 CYCSP99999 105 aaKnown RBP10.33□□□□□ -0.76
PNKP-202ENST00000593706 CLINT1Q14677 625 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 FCN2Q15485 313 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 Q6ZRG5 221 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 TMEM256Q8N2U0 113 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 OR5C1Q8NGR4 320 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 PPP1R1CQ8WVI7 109 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 LINC01587Q99440 93 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 PFDN5Q99471 154 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
PNKP-202ENST00000593706 H3BTX0 84 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
PNKP-202ENST00000593706 AZU1P20160 251 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 OR1L4Q8NGR5 311 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 THAP6Q8TBB0 222 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 LRRC20Q8TCA0 184 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 RPUSD4Q96CM3 377 aaKnown RBP10.32□□□□□ -0.76
PNKP-202ENST00000593706 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
PNKP-202ENST00000593706 PLAC8L1A1L4L8 177 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 CBY3A6NI87 242 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 PRAC2D3DTV9 90 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 MPC2O95563 127 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 RLN2P04090 185 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
PNKP-202ENST00000593706 SSNA1O43805 119 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 ZNF253O75346 499 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 TAS2R60P59551 318 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 GUK1Q16774 197 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 FAM167A-AS1Q96KT0 104 aa10.3□□□□□ -0.76
PNKP-202ENST00000593706 WDR61Q9GZS3 305 aaKnown RBP10.3□□□□□ -0.76
PNKP-202ENST00000593706 TIMM8BQ9Y5J9 83 aaPredicted RBP10.3□□□□□ -0.76
PNKP-202ENST00000593706 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
PNKP-202ENST00000593706 NDUFB4O95168 129 aa10.29□□□□□ -0.76
PNKP-202ENST00000593706 PTTG1O95997 202 aa10.29□□□□□ -0.76
PNKP-202ENST00000593706 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
PNKP-202ENST00000593706 SLC25A2Q9BXI2 301 aa10.29□□□□□ -0.76
PNKP-202ENST00000593706 NOP10Q9NPE3 64 aaKnown RBP10.29□□□□□ -0.76
PNKP-202ENST00000593706 CDKN1BP46527 198 aa10.28□□□□□ -0.76
PNKP-202ENST00000593706 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
PNKP-202ENST00000593706 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
PNKP-202ENST00000593706 SPATA12Q7Z6I5 190 aa10.28□□□□□ -0.76
PNKP-202ENST00000593706 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms