RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, human

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD3-210	ENST00000592361	C2orf50	Q96LR7	162 aa		12	□□□□□ -0.49
MBD3-210	ENST00000592361	LYRM2	Q9NU23	88 aa	Predicted RBP	12	□□□□□ -0.49
MBD3-210	ENST00000592361	UBE2L5P	A0A1B0GUS4	154 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	PLAC8L1	A1L4L8	177 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	ZNF253	O75346	499 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	MPDU1	O75352	247 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	CST7	O76096	145 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	RLN2	P04090	185 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	IGLC2	P0DOY2	106 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	AZU1	P20160	251 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	NOP10	Q9NPE3	64 aa	Known RBP	11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	WDR83OS	Q9Y284	106 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	PKD1	P98161	4303 aa		11.99	□□□□□ -0.49
MBD3-210	ENST00000592361	FAM240B	A0A1B0GVZ2	78 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	PRM2	P04554	102 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	RPL29	P47914	159 aa	Known RBP	11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	ATP6V1F	Q16864	119 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	GFI1B	Q5VTD9	330 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	MZT2B	Q6NZ67	158 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	PYGO2	Q9BRQ0	406 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	KIAA1109	Q2LD37	5005 aa		11.98	□□□□□ -0.49
MBD3-210	ENST00000592361	SLC17A3	O00476	420 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	PLA2G10	O15496	165 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	H2AFB2	P0C5Z0	115 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	PDE6H	Q13956	83 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	VWC2	Q2TAL6	325 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	MIC13	Q5XKP0	118 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	MRPL53	Q96EL3	112 aa	Known RBP	11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	SEC22C	Q9BRL7	303 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	KCNIP2	Q9NS61	270 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	SLC39A9	Q9NUM3	307 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	PRELID1	Q9Y255	219 aa		11.97	□□□□□ -0.49
MBD3-210	ENST00000592361	NBDY	A0A0U1RRE5	68 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	FAM24A	A6NFZ4	105 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	SNRPC	P09234	159 aa	Known RBP	11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	FCN2	Q15485	313 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	TTC32	Q5I0X7	151 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	ZNF680	Q8NEM1	530 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	ZNF503	Q96F45	646 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	AAMDC	Q9H7C9	122 aa		11.96	□□□□□ -0.49
MBD3-210	ENST00000592361	NPIPB6	E9PJ23	425 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361		H3BTX0	84 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	SLC25A5	P05141	298 aa	Known RBP	11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	M6PR	P20645	277 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	FGF7	P21781	194 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	OR5I1	Q13606	314 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	LINC00299	Q6ZSB3	139 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	C6orf223	Q8N319	242 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	CHAC2	Q8WUX2	184 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	RNF141	Q8WVD5	230 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	SAT2	Q96F10	170 aa	Predicted RBP	11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	GPN1	Q9HCN4	374 aa	Predicted RBP	11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	TMEM14C	Q9P0S9	112 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361	TIMM9	Q9Y5J7	89 aa		11.95	□□□□□ -0.5
MBD3-210	ENST00000592361		H3BQ15	152 aa		11.94	□□□□□ -0.5
MBD3-210	ENST00000592361	MORN5	Q5VZ52	161 aa		11.94	□□□□□ -0.5
MBD3-210	ENST00000592361	TMEM252	Q8N6L7	170 aa		11.94	□□□□□ -0.5
MBD3-210	ENST00000592361	ZNRF2	Q8NHG8	242 aa		11.94	□□□□□ -0.5
MBD3-210	ENST00000592361	S100Z	Q8WXG8	99 aa		11.94	□□□□□ -0.5
MBD3-210	ENST00000592361	DNAH11	Q96DT5	4516 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	TRAV12-3	A0A0B4J271	114 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361		J3KRW8	73 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	HIST1H1E	P10412	219 aa	Known RBP	11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	RAB32	Q13637	225 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	SSX7	Q7RTT5	188 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	RXFP4	Q8TDU9	374 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	SLC25A31	Q9H0C2	315 aa		11.93	□□□□□ -0.5
MBD3-210	ENST00000592361	TRBV19	A0A075B6N1	114 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	TRAV26-1	A0A087WT03	109 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	PRAC2	D3DTV9	90 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361		H3BNG1	76 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	LINC00612	Q8N6U2	182 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	ENKUR	Q8TC29	256 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	LINC00477	Q96M19	166 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	NPCDR1	Q9BY65	106 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	C11orf1	Q9H5F2	150 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	ZNF586	Q9NXT0	402 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	LINC00588	Q9Y4M8	146 aa		11.92	□□□□□ -0.5
MBD3-210	ENST00000592361	TRAV5	A0A0B4J249	113 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	IGSF23	A1L1A6	192 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	GAGE12B	A1L429	117 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	C7orf71	A4D174	169 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	GAGE7	O76087	117 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	GAGE12F	P0CL80	117 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	GAGE12G	P0CL81	117 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	GAGE12I	P0CL82	117 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	CT45A10	P0DMU9	189 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	PRB4	P10163	310 aa	Predicted RBP	11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	DAZ2	Q13117	558 aa	Known RBP	11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	TMEM78	Q5T7P6	136 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	KRTAP17-1	Q9BYP8	105 aa		11.91	□□□□□ -0.5
MBD3-210	ENST00000592361	TRGV2	A0A075B6R0	118 aa		11.9	□□□□□ -0.5
MBD3-210	ENST00000592361	CYCS	P99999	105 aa	Known RBP	11.9	□□□□□ -0.5
MBD3-210	ENST00000592361	KIR3DS1	Q14943	382 aa		11.9	□□□□□ -0.5
MBD3-210	ENST00000592361	PCLO	Q9Y6V0	5065 aa		11.89	□□□□□ -0.51
MBD3-210	ENST00000592361		E5RGE8	158 aa		11.89	□□□□□ -0.51
MBD3-210	ENST00000592361	C17orf112	F2Z3M2	114 aa		11.89	□□□□□ -0.51
MBD3-210	ENST00000592361	GPX1	P07203	203 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 83 ms