RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IGHV3OR16-13A0A075B7E8 117 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 A0A087X0K7 114 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 TRAV8-1A0A0A6YYK1 113 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 IGHV3-74A0A0B4J1X5 117 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 NDUFA4O00483 81 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 BUB3O43684 328 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-206ENST00000588860 TCL1AP56279 114 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
SMAD4-206ENST00000588860 C1orf194Q5T5A4 169 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 FAM231DQ6ZW35 169 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 PRDM13Q9H4Q3 707 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF702PQ9H963 129 aa6.74□□□□□ -1.33
SMAD4-206ENST00000588860 FLNAP21333 2647 aaKnown RBP6.74□□□□□ -1.33
SMAD4-206ENST00000588860 ZANQ9Y493 2812 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 M0R3E3 92 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF253O75346 499 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 IGHG4P01861 327 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 APOHP02749 345 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-206ENST00000588860 TRGC1P0CF51 173 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 NDUFA6P56556 154 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 PSG3Q16557 428 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 ACTL10Q5JWF8 245 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 TMEM183AQ8IXX5 376 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 FRZBQ92765 325 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 GRAMD2BQ96HH9 432 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 DUX5Q96PT3 197 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF492Q9P255 531 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 U3KQE9 123 aa6.73□□□□□ -1.33
SMAD4-206ENST00000588860 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 SERTM2A0A1B0GWG4 89 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 PHOX2AO14813 284 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 CD5LO43866 347 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 CA1P00915 261 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 PSMB8P28062 276 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HLA-DMBP28068 263 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 AKR1D1P51857 326 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 SLC35B1P78383 322 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 FABP9Q0Z7S8 132 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 FAM209BQ5JX69 171 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 IGFL4Q6B9Z1 124 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 C16orf54Q6UWD8 224 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 C10orf99Q6UWK7 81 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 UNQ9165/PRO28630Q6UXU0 137 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 GBGT1Q8N5D6 347 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 ASCL2Q99929 193 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 SLC50A1Q9BRV3 221 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF331Q9NQX6 463 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 YAE1D1Q9NRH1 226 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 PEF1Q9UBV8 284 aaKnown RBP6.72□□□□□ -1.33
SMAD4-206ENST00000588860 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
SMAD4-206ENST00000588860 SMIM27A0A1W2PRY6 76 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 IZUMO1RA6ND01 250 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 UBE2CO00762 179 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 CHEK1O14757 476 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 SPINK4O60575 86 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 P01737 135 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 RPLP1P05386 114 aaKnown RBP6.71□□□□□ -1.34
SMAD4-206ENST00000588860 MEOX2P50222 304 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 RPL19P84098 196 aaKnown RBP6.71□□□□□ -1.34
SMAD4-206ENST00000588860 FOXE3Q13461 319 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 LINC00322Q6ZN03 302 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-206ENST00000588860 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 GLMPQ8WWB7 406 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 ZC2HC1AQ96GY0 325 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 SMR3AQ99954 134 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 ZFP30Q9Y2G7 519 aa6.71□□□□□ -1.34
SMAD4-206ENST00000588860 SVEP1Q4LDE5 3571 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 C19orf71A6NCJ1 209 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-206ENST00000588860 ELANEP08246 267 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 CBLN1P23435 193 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 LCN12Q6JVE5 192 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms