RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 FAM210BQ96KR6 192 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 MGST2Q99735 147 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
LIG3-207ENST00000586119 GOLT1BQ9Y3E0 138 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 A0A0D9SG52 128 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 C17orf112F2Z3M2 114 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 SMLR1H3BR10 107 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 AGPAT2O15120 278 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 AZU1P20160 251 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 FGF7P21781 194 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 DAD1P61803 113 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 OPCMLQ14982 345 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 RRN3P1Q2M238 152 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 HYLS1Q96M11 299 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 RSG1Q9BU20 258 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
LIG3-207ENST00000586119 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
LIG3-207ENST00000586119 BORCS7-ASMTA0A0B4J1R7 106 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 M0R2Z0 102 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 ISLRO14498 428 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 CRXO43186 299 aaPredicted RBP8.17□□□□□ -1.1
LIG3-207ENST00000586119 C1orf194Q5T5A4 169 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 Q6ZRG5 221 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 KCNRGQ8N5I3 272 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 OR11H4Q8NGC9 324 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 NPCDR1Q9BY65 106 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 SMIM3Q9BZL3 60 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 DOK5Q9P104 306 aa8.17□□□□□ -1.1
LIG3-207ENST00000586119 TRAV12-2A0A075B6T6 113 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 A8MTW9 85 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 HYPMO75409 117 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 LINC00869P0C866 280 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 RNF182Q8N6D2 247 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 OR1L4Q8NGR5 311 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 TIMM9Q9Y5J7 89 aa8.16□□□□□ -1.1
LIG3-207ENST00000586119 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 ORM2P19652 201 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 CNN1P51911 297 aaKnown RBP8.15□□□□□ -1.1
LIG3-207ENST00000586119 B2MP61769 119 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 MIC13Q5XKP0 118 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 BAP18Q8IXM2 172 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 OR1B1Q8NGR6 318 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 ZNRF2Q8NHG8 242 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 PFDN5Q99471 154 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 ARPC5LQ9BPX5 153 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 TMEM208Q9BTX3 173 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 HIGD1AQ9Y241 93 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
LIG3-207ENST00000586119 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 TEX48A0A1B0GUV7 120 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 F5H768 121 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 NUDT3O95989 172 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
LIG3-207ENST00000586119 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
LIG3-207ENST00000586119 GPR82Q96P67 336 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 ATG101Q9BSB4 218 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 PSMG3Q9BT73 122 aaPredicted RBP8.14□□□□□ -1.11
LIG3-207ENST00000586119 SLC25A39Q9BZJ4 359 aaPredicted RBP8.14□□□□□ -1.11
LIG3-207ENST00000586119 ARL6Q9H0F7 186 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
LIG3-207ENST00000586119 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 BCL2L11O43521 198 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 OR5G3P0C626 314 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 CXCL2P19875 107 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 SERF2P84101 59 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 C10orf113Q5VZT2 155 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 RPL7L1Q6DKI1 246 aaKnown RBP8.13□□□□□ -1.11
LIG3-207ENST00000586119 TMUB2Q71RG4 321 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 SHANK2-AS3Q9BTD1 123 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 ARV1Q9H2C2 271 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
LIG3-207ENST00000586119 H3BRN7 92 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 GALR1P47211 349 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 LGALSLQ3ZCW2 172 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms