RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
GFAP-205ENST00000585543 IGKV3-20P01619 116 aa12.34□□□□□ -0.43
GFAP-205ENST00000585543 HLA-DMBP28068 263 aa12.34□□□□□ -0.43
GFAP-205ENST00000585543 HIST1H1AQ02539 215 aaPredicted RBP12.34□□□□□ -0.43
GFAP-205ENST00000585543 OR8A1Q8NGG7 326 aa12.34□□□□□ -0.43
GFAP-205ENST00000585543 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
GFAP-205ENST00000585543 AGRNO00468 2067 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 F6UB75 175 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 ICAM4Q14773 271 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 C9orf62Q8N4C0 152 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 PHYHIPLQ96FC7 376 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 U3KQK5 164 aa12.33□□□□□ -0.44
GFAP-205ENST00000585543 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
GFAP-205ENST00000585543 NDUFB4O95168 129 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 GCHFRP30047 84 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 CNN1P51911 297 aaKnown RBP12.32□□□□□ -0.44
GFAP-205ENST00000585543 DEFB1P60022 68 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
GFAP-205ENST00000585543 EXOC3-AS1Q8N2X6 119 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 CMTM2Q8TAZ6 248 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 FAM213BQ8TBF2 198 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 ZNF503Q96F45 646 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 Q9H3A6 140 aa12.32□□□□□ -0.44
GFAP-205ENST00000585543 MAP1LC3B2A6NCE7 125 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 SPRY2O43597 315 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 AMBPP02760 352 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 RAB5CP51148 216 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 MAP1LC3BQ9GZQ8 125 aa12.31□□□□□ -0.44
GFAP-205ENST00000585543 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
GFAP-205ENST00000585543 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
GFAP-205ENST00000585543 TEX46H3BTG2 121 aa12.29□□□□□ -0.44
GFAP-205ENST00000585543 M0R3E3 92 aa12.29□□□□□ -0.44
GFAP-205ENST00000585543 ZNF705DP0CH99 300 aaPredicted RBP12.29□□□□□ -0.44
GFAP-205ENST00000585543 ZNF705BP0CI00 300 aaPredicted RBP12.29□□□□□ -0.44
GFAP-205ENST00000585543 RNF183Q96D59 192 aa12.29□□□□□ -0.44
GFAP-205ENST00000585543 RETNQ9HD89 108 aa12.29□□□□□ -0.44
GFAP-205ENST00000585543 BOLA2-SMG1P6H3BVE0 249 aa12.28□□□□□ -0.44
GFAP-205ENST00000585543 TSPOP30536 169 aa12.28□□□□□ -0.44
GFAP-205ENST00000585543 NKX2-5P52952 324 aaPredicted RBP12.28□□□□□ -0.44
GFAP-205ENST00000585543 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
GFAP-205ENST00000585543 XCL2Q9UBD3 114 aa12.28□□□□□ -0.44
GFAP-205ENST00000585543 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.44
GFAP-205ENST00000585543 PGPA6NDG6 321 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 A8MTW9 85 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
GFAP-205ENST00000585543 FXYD7P58549 80 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 TMEM78Q5T7P6 136 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 SSX7Q7RTT5 188 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 SFT2D1Q8WV19 159 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 OVOL2Q9BRP0 275 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.45
GFAP-205ENST00000585543 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 K7EQM0 130 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 INSP01308 110 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 SLC25A5P05141 298 aaKnown RBP12.26□□□□□ -0.45
GFAP-205ENST00000585543 LEPP41159 167 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 ARL6IP6Q8N6S5 226 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 RARRES2Q99969 163 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 GOLT1BQ9Y3E0 138 aa12.26□□□□□ -0.45
GFAP-205ENST00000585543 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 FHITP49789 147 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 SULT1A2P50226 295 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 PPT1P50897 306 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 C5orf17Q8NAS9 161 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 OR11H2Q8NH07 326 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
GFAP-205ENST00000585543 NKX6-2Q9C056 277 aaPredicted RBP12.25□□□□□ -0.45
GFAP-205ENST00000585543 IGKV2-40A0A087WW87 121 aaPredicted RBP12.24□□□□□ -0.45
GFAP-205ENST00000585543 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 RBAKDNA6NC62 111 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 IGKV2D-40P01614 121 aaPredicted RBP12.24□□□□□ -0.45
GFAP-205ENST00000585543 HBE1P02100 147 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
GFAP-205ENST00000585543 CDKN1BP46527 198 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 AMTNQ6UX39 209 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 IGF2BP2-AS1Q96M15 143 aa12.24□□□□□ -0.45
GFAP-205ENST00000585543 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 M0R2Z0 102 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 IFNA7P01567 189 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 UBE2G2P60604 165 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 C9orf47Q6ZRZ4 202 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 TMPRSS5Q9H3S3 457 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 ARL2-SNX15V9GYD0 113 aa12.23□□□□□ -0.45
GFAP-205ENST00000585543 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
GFAP-205ENST00000585543 A0A1B0GV50 99 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms