RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 RNF182Q8N6D2 247 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 DCANP1Q8TF63 244 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
ERBB2-216ENST00000584014 CYTL1Q9NRR1 136 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 NAGKQ9UJ70 344 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 H3BQ15 152 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 ZNF705DP0CH99 300 aaPredicted RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 ZNF705BP0CI00 300 aaPredicted RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 SPP1P10451 314 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 TPT1P13693 172 aaKnown RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 C4BPBP20851 252 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 HLA-DMBP28068 263 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 MEOX2P50222 304 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 TAS2R45P59539 299 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 EIF5AP63241 154 aaKnown RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 VAMP3Q15836 100 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 STHQ8IWL8 128 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 ZNF738Q8NE65 137 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 PSMG3Q9BT73 122 aaPredicted RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 PAXXQ9BUH6 204 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 SLC25A2Q9BXI2 301 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 ACTR3CQ9C0K3 210 aaPredicted RBP6.21□□□□□ -1.42
ERBB2-216ENST00000584014 OR51M1Q9H341 326 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 HRH4Q9H3N8 390 aa6.21□□□□□ -1.42
ERBB2-216ENST00000584014 LOC102724200A0A096LPH7 203 aaPredicted RBP6.2□□□□□ -1.42
ERBB2-216ENST00000584014 TRAV2A0A0B4J234 112 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 A0A1B0GV50 99 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 C5orf52A6NGY3 159 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 F6UB75 175 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 PAGE4O60829 102 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 MALP21145 153 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 CDC34P49427 236 aaPredicted RBP6.2□□□□□ -1.42
ERBB2-216ENST00000584014 PSMB3P49720 205 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 UBE2L3P68036 154 aaKnown RBP6.2□□□□□ -1.42
ERBB2-216ENST00000584014 SERF2P84101 59 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 KHDC3LQ587J8 217 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
ERBB2-216ENST00000584014 C20orf173Q96LM9 149 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 RPRMQ9NS64 109 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 ZNF586Q9NXT0 402 aa6.2□□□□□ -1.42
ERBB2-216ENST00000584014 RBMY1BA6NDE4 496 aaKnown RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 RBMY1EA6NEQ0 496 aaKnown RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 ZNF705FA8MVS1 300 aaPredicted RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 SLC17A3O00476 420 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 ISLRO14498 428 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 RBMY1DP0C7P1 496 aaKnown RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 CAMPP49913 170 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 FXYD7P58549 80 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
ERBB2-216ENST00000584014 LCN15Q6UWW0 184 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 BAP18Q8IXM2 172 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 C9orf62Q8N4C0 152 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 FAM213BQ8TBF2 198 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 FAM167A-AS1Q96KT0 104 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 RPH3ALQ9UNE2 315 aa6.19□□□□□ -1.42
ERBB2-216ENST00000584014 A0A087X0K7 114 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 TRAV8-2A0A0B4J237 113 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 MRPS12O15235 138 aaKnown RBP6.18□□□□□ -1.42
ERBB2-216ENST00000584014 IGLC2P0DOY2 106 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 TIRAPP58753 221 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
ERBB2-216ENST00000584014 ICAM4Q14773 271 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 PSG3Q16557 428 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 GUK1Q16774 197 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 GDF5OSQ5U4N7 250 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 SAMD13Q5VXD3 122 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 SBSPONQ8IVN8 264 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 RPP25LQ8N5L8 163 aaKnown RBP6.18□□□□□ -1.42
ERBB2-216ENST00000584014 RPUSD4Q96CM3 377 aaKnown RBP6.18□□□□□ -1.42
ERBB2-216ENST00000584014 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 TMEM14CQ9P0S9 112 aa6.18□□□□□ -1.42
ERBB2-216ENST00000584014 TRBV19A0A075B6N1 114 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 SOCS3O14543 225 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 CXorf1O96002 111 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 CA1P00915 261 aaPredicted RBP6.17□□□□□ -1.42
ERBB2-216ENST00000584014 SEC11BP0C7V7 166 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 GCHFRP30047 84 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 APOC4P55056 127 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 UBE2G2P60604 165 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 PSG9Q00887 426 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 HAGHQ16775 308 aa6.17□□□□□ -1.42
ERBB2-216ENST00000584014 EIF5AL1Q6IS14 154 aaKnown RBP6.17□□□□□ -1.42
ERBB2-216ENST00000584014 TMEM88Q6PEY1 159 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms