RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 GNPNAT1Q96EK6 184 aaPredicted RBP11.33□□□□□ -0.6
SKA2-209ENST00000583976 FAM167A-AS1Q96KT0 104 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 A0A1W2PPV4 95 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 HMGB3O15347 200 aaKnown RBP11.32□□□□□ -0.6
SKA2-209ENST00000583976 BCL2L11O43521 198 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 IGLC2P0DOY2 106 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
SKA2-209ENST00000583976 SAMD13Q5VXD3 122 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 Q6ZTC4 211 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
SKA2-209ENST00000583976 OR51M1Q9H341 326 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 HRH4Q9H3N8 390 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
SKA2-209ENST00000583976 F6UB75 175 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 SLC17A3O00476 420 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 OR7C2O60412 319 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 OR10J4P0C629 311 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 SERF2P84101 59 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 LCN15Q6UWW0 184 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 X6R8D5 127 aa11.31□□□□□ -0.6
SKA2-209ENST00000583976 IGKV3-20P01619 116 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
SKA2-209ENST00000583976 ZNF767PQ75MW2 155 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 RNF141Q8WVD5 230 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
SKA2-209ENST00000583976 HYLS1Q96M11 299 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 ZNF331Q9NQX6 463 aaPredicted RBP11.3□□□□□ -0.6
SKA2-209ENST00000583976 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
SKA2-209ENST00000583976 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 MBP02144 154 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 CDC34P49427 236 aaPredicted RBP11.29□□□□□ -0.6
SKA2-209ENST00000583976 TAS2R45P59539 299 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 PSG3Q16557 428 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 GUK1Q16774 197 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 KHDC3LQ587J8 217 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
SKA2-209ENST00000583976 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
SKA2-209ENST00000583976 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
SKA2-209ENST00000583976 ZNF705EA8MWA4 302 aaPredicted RBP11.28□□□□□ -0.6
SKA2-209ENST00000583976 H3BMM0 161 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
SKA2-209ENST00000583976 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
SKA2-209ENST00000583976 SPP1P10451 314 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 AKR1C8PQ5T2L2 129 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 EBLN2Q6P2I7 272 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 PKD1P98161 4303 aa11.28□□□□□ -0.6
SKA2-209ENST00000583976 NDUFB4O95168 129 aa11.27□□□□□ -0.61
SKA2-209ENST00000583976 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
SKA2-209ENST00000583976 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
SKA2-209ENST00000583976 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
SKA2-209ENST00000583976 ACTR3CQ9C0K3 210 aaPredicted RBP11.27□□□□□ -0.61
SKA2-209ENST00000583976 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
SKA2-209ENST00000583976 A0A0J9YX75 114 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 MIFP14174 115 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
SKA2-209ENST00000583976 TCTAP57738 103 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
SKA2-209ENST00000583976 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
SKA2-209ENST00000583976 TRAV10A0A0B4J240 114 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 ZNF253O75346 499 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 ARL14EPLP0DKL9 152 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 TPT1P13693 172 aaKnown RBP11.25□□□□□ -0.61
SKA2-209ENST00000583976 FXYD7P58549 80 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
SKA2-209ENST00000583976 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
SKA2-209ENST00000583976 PSG9Q00887 426 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
SKA2-209ENST00000583976 BAP18Q8IXM2 172 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 C9orf62Q8N4C0 152 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 PHYHIPLQ96FC7 376 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
SKA2-209ENST00000583976 M0R3E3 92 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 SEC11BP0C7V7 166 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
SKA2-209ENST00000583976 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms