RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 ARPC5O15511 151 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 HYPMO75409 117 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 IFNA5P01569 189 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 ORM2P19652 201 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
TOP3A-215ENST00000583328 ZNF266Q14584 549 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 SPATA31B1PQ5VZV4 182 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 AKAP14Q86UN6 197 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 OR1B1Q8NGR6 318 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 PPP1R14BQ96C90 147 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 PARD6GQ9BYG4 376 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-215ENST00000583328 WFDC1Q9HC57 220 aa8.63□□□□□ -1.03
TOP3A-215ENST00000583328 A0A1B0GVG6 124 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 HMSDA8MTL9 139 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 B2MP61769 119 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 Q6ZRG5 221 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 S100A7AQ86SG5 101 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 SCGB1C1Q8TD33 95 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 ARL6Q9H0F7 186 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 DOK5Q9P104 306 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
TOP3A-215ENST00000583328 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-215ENST00000583328 LYRM9A8MSI8 78 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 OR5G3P0C626 314 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 DEFB130BP0DP73 79 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 DEFB130AP0DP74 79 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 PSMB3P49720 205 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 ZNF345Q14585 488 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 C1orf194Q5T5A4 169 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 FAM78BQ5VT40 261 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 OR11H4Q8NGC9 324 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 OR1L4Q8NGR5 311 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 PFDN5Q99471 154 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 ARV1Q9H2C2 271 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 SLC39A9Q9NUM3 307 aa8.61□□□□□ -1.03
TOP3A-215ENST00000583328 ZNF98A6NK75 572 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 ZNF705GA8MUZ8 300 aaPredicted RBP8.6□□□□□ -1.03
TOP3A-215ENST00000583328 F6UB75 175 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 H3BRN7 92 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 TAAR5O14804 337 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 SSX7Q7RTT5 188 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 SLC25A39Q9BZJ4 359 aaPredicted RBP8.6□□□□□ -1.03
TOP3A-215ENST00000583328 Q9H8V8 135 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 RNF24Q9Y225 148 aa8.6□□□□□ -1.03
TOP3A-215ENST00000583328 BORCS7-ASMTA0A0B4J1R7 106 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 A0A0D9SG52 128 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 A0A0J9YX75 114 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 C1QBP02746 253 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 PRM2P04554 102 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 OR8I2Q8N0Y5 310 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 KCNRGQ8N5I3 272 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 TMEM37Q8WXS4 190 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 IGF2BP2-AS1Q96M15 143 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 GPR82Q96P67 336 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 UHRF2Q96PU4 802 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 DNAJC4Q9NNZ3 241 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 TIMM9Q9Y5J7 89 aa8.59□□□□□ -1.03
TOP3A-215ENST00000583328 SOCS3O14543 225 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 ATP5G1P05496 136 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
TOP3A-215ENST00000583328 ATP5G3P48201 142 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 TTC32Q5I0X7 151 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 RPL7L1Q6DKI1 246 aaKnown RBP8.58□□□□□ -1.04
TOP3A-215ENST00000583328 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 HSD17B11Q8NBQ5 300 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-215ENST00000583328 SLC25A32Q9H2D1 315 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 SLC25A22Q9H936 323 aa8.58□□□□□ -1.04
TOP3A-215ENST00000583328 ISLRO14498 428 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 RPL7P18124 248 aaKnown RBP8.57□□□□□ -1.04
TOP3A-215ENST00000583328 CXCL2P19875 107 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 GALR1P47211 349 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 FFAR4Q5NUL3 377 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 C16orf92Q96LL3 132 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 HYLS1Q96M11 299 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
TOP3A-215ENST00000583328 KANTRA0A1W2PQU2 76 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 CBY3A6NI87 242 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 BCL2L11O43521 198 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 ATP6V0CP27449 155 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 CD300CQ08708 224 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 GCSAMLQ5JQS6 135 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 OR2G3Q8NGZ4 309 aa8.56□□□□□ -1.04
TOP3A-215ENST00000583328 GNPNAT1Q96EK6 184 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-215ENST00000583328 MRPL32Q9BYC8 188 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms