RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
CDK5RAP3-206ENST00000578018 C15orf53Q8NAA6 179 aa11.73□□□□□ -0.53
CDK5RAP3-206ENST00000578018 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 CXCL2P19875 107 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RHOBP62745 196 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 NHLH2Q02577 135 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 PXDC1Q5TGL8 231 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 Q6ZNX1 250 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LRRC20Q8TCA0 184 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 CHAC2Q8WUX2 184 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 MUC4Q99102 2169 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 AGPAT2O15120 278 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 DEFB130BP0DP73 79 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 DEFB130AP0DP74 79 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LINC00305Q7Z4B0 112 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TAS2R60P59551 318 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 LINC01587Q99440 93 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MGST2Q99735 147 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MED14OSP0DP75 135 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CDKN1BP46527 198 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RAB31Q13636 194 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TMEM37Q8WXS4 190 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C16orf74Q96GX8 76 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 F5H768 121 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SLC17A3O00476 420 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MPDU1O75352 247 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 Q5BKY6 102 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SOHLH1Q5JUK2 328 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 G3V3Q6 166 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5G1P05496 136 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 IGLC2P0DOY2 106 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 HTN1P15515 57 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5G3P48201 142 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OPCMLQ14982 345 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CBY3A6NI87 242 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PRAC2D3DTV9 90 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H3BTX0 84 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H7BYZ3 331 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CAMLGP49069 296 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TMEM263Q8WUH6 116 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TIMM8BQ9Y5J9 83 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H3BQ15 152 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 NUDT3O95989 172 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 GFI1BQ5VTD9 330 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5SQ99766 215 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PXMP4Q9Y6I8 212 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 FGF7P21781 194 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 CLINT1Q14677 625 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 WDR61Q9GZS3 305 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 TNFSF18Q9UNG2 199 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RYR1P21817 5038 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 Q6ZRG5 221 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 ZNF575Q86XF7 245 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 WFDC1Q9HC57 220 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 LINC00588Q9Y4M8 146 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms