RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001		A0A1B0GUT8	65 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001		K7EP13	123 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZNF80	P51504	273 aa	Predicted RBP	11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	HSBP1L1	C9JCN9	74 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	CT45A10	P0DMU9	189 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	PCP4	P48539	62 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	KLK15	Q9H2R5	256 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	LINC00574	Q9H8X3	128 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZFP30	Q9Y2G7	519 aa		11.63	□□□□□ -0.55
PRPF8-216	ENST00000577001	TRAV26-2	A0A0B4J265	109 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001		A0A1B0GXF2	115 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	CACNG7	P62955	275 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	AMMECR1L	Q6DCA0	310 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	UBTD1	Q9HAC8	227 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	C1RL	Q9NZP8	487 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	TRBV19	A0A075B6N1	114 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	FNDC10	F2Z333	226 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	FMC1	Q96HJ9	113 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	MAP1LC3C	Q9BXW4	147 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	AP5S1	Q9NUS5	200 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	FBLL1	A6NHQ2	334 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	NBR2	O15453	112 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	SRD5A1	P18405	259 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	PKD1L2	Q7Z442	2459 aa		11.62	□□□□□ -0.55
PRPF8-216	ENST00000577001	C19orf71	A6NCJ1	209 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZFP36	P26651	326 aa	Known RBP	11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	GLMP	Q8WWB7	406 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	TMEM189	A5PLL7	270 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	RPL11	P62913	178 aa	Known RBP	11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	STXBP6	Q8NFX7	210 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	DPM3	Q9P2X0	92 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	TNFRSF13B	O14836	293 aa	Predicted RBP	11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	CRYGC	P07315	174 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	SIGLEC15	Q6ZMC9	328 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001	FAM231D	Q6ZW35	169 aa		11.61	□□□□□ -0.55
PRPF8-216	ENST00000577001		A0A1W2PPR1	153 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	SH2D1A	O60880	128 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	ANKRD39	Q53RE8	183 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	CLEC19A	Q6UXS0	136 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	OTOR	Q9NRC9	128 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	UFC1	Q9Y3C8	167 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001		B9A039	149 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	LIPF	P07098	398 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	AAMDC	Q9H7C9	122 aa		11.6	□□□□□ -0.55
PRPF8-216	ENST00000577001	LOC105371242	A0A075B767	164 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	CLEC3B	P05452	202 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	EGR2	P11161	476 aa	Predicted RBP	11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	SLC25A34	Q6PIV7	304 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	BRD3OS	Q6XYD6	125 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	PRSS22	Q9GZN4	317 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	THYN1	Q9P016	225 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	CKS2	P33552	79 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	LY6E	Q16553	131 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	VMO1	Q7Z5L0	202 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZNF738	Q8NE65	137 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZNF414	Q96IQ9	312 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	CFAP46	Q8IYW2	2715 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	PIEZO1	Q92508	2521 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	IGHV3-11	P01762	117 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	OR4A5	Q8NH83	315 aa		11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	NEU4	Q8WWR8	484 aa	Predicted RBP	11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	MRPL27	Q9P0M9	148 aa	Known RBP	11.59	□□□□□ -0.55
PRPF8-216	ENST00000577001	PRELID3A	Q96N28	172 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	FANCD2OS	Q96PS1	177 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	SHANK2-AS3	Q9BTD1	123 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	C21orf62	Q9NYP8	219 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	NPY	P01303	97 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	CRYGB	P07316	175 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	TMEM191A	Q9H0A3	160 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	NCOR1P1	Q9H4R4	102 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	DKK2	Q9UBU2	259 aa		11.58	□□□□□ -0.56
PRPF8-216	ENST00000577001	IGF1	P05019	195 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	PSG3	Q16557	428 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	HIST2H2BD	Q6DRA6	164 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	PCP2	Q8IVA1	136 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	WIPF2	Q8TF74	440 aa	Predicted RBP	11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	SIGLEC8	Q9NYZ4	499 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	COX11	Q9Y6N1	276 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	LINC00311	Q8N616	119 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	ARPC1A	Q92747	370 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	KLF12	Q9Y4X4	402 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	NAV2	Q8IVL1	2488 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	CSN1S1	P47710	185 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	RBPJ	Q06330	500 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	FAM71F2	Q6NXP2	309 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	CHODL	Q9H9P2	273 aa		11.57	□□□□□ -0.56
PRPF8-216	ENST00000577001	C5orf64	Q2M2E5	130 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	C15orf32	Q32M92	178 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	COX19	Q49B96	90 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	MTURN	Q8N3F0	131 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001		K7EQM0	130 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	RIG	Q13278	110 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	IL17REL	Q6ZVW7	336 aa		11.56	□□□□□ -0.56
PRPF8-216	ENST00000577001	RHOG	P84095	191 aa		11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	TRAV8-6	A0A0B4J262	113 aa		11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	SFTA2	Q6UW10	78 aa		11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	C7orf71	A4D174	169 aa		11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	MFAP4	P55083	255 aa		11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	KLF5	Q13887	457 aa	Predicted RBP	11.55	□□□□□ -0.56
PRPF8-216	ENST00000577001	MRPL51	Q4U2R6	128 aa	Known RBP	11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms